13 homologs were found in PanDaTox collection
for query gene Mesil_1320 on replicon NC_014212
Organism: Meiothermus silvanus DSM 9946



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014212  Mesil_1320  DNA-directed RNA polymerase, omega subunit  100 
 
 		 108 aa  218  3e-56  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.100199 
 
 
-
 
NC_013946  Mrub_2094  DNA-directed RNA polymerase omega subunit  81 
 
 		 102 aa  174  5e-43  Meiothermus ruber DSM 1279  Bacteria  normal  0.490083  normal  1 
 
 
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NC_008025  Dgeo_0252  DNA-directed RNA polymerase subunit omega  44.83 
 
 		 99 aa  65.1  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2043  DNA-directed RNA polymerase subunit omega  38.96 
 
 		 90 aa  43.1  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.529768  decreased coverage  0.00243953 
 
 
-
 
NC_007333  Tfu_1063  DNA-directed RNA polymerase subunit omega  38.67 
 
 		 88 aa  41.6  0.004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1361  DNA-directed RNA polymerase, omega subunit  38.67 
 
 		 88 aa  41.6  0.004  Thermobispora bispora DSM 43833  Bacteria  normal  0.465047  normal  0.0594438 
 
 
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NC_007777  Francci3_3194  DNA-directed RNA polymerase subunit omega  36 
 
 		 151 aa  40.4  0.007  Frankia sp. CcI3  Bacteria  normal  0.0239172  normal  1 
 
 
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NC_013521  Sked_18040  DNA-directed RNA polymerase subunit omega  38.96 
 
 		 94 aa  40.8  0.007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0135387  normal  1 
 
 
-
 
NC_013169  Ksed_12730  DNA-directed RNA polymerase, omega subunit  38.75 
 
 		 141 aa  40.4  0.008  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0393842  normal  0.0422881 
 
 
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NC_013216  Dtox_2317  DNA-directed RNA polymerase, omega subunit  38.36 
 
 		 68 aa  40.4  0.008  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000192239  hitchhiker  0.00377511 
 
 
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NC_008148  Rxyl_1472  DNA-directed RNA polymerase, omega subunit  35.21 
 
 		 106 aa  40.4  0.009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.111118  n/a   
 
 
-
 
NC_009921  Franean1_1714  DNA-directed RNA polymerase subunit omega  36 
 
 		 94 aa  40.4  0.009  Frankia sp. EAN1pec  Bacteria  normal  0.770422  hitchhiker  0.00730619 
 
 
-
 
NC_012034  Athe_1036  DNA-directed RNA polymerase, omega subunit  34.29 
 
 		 77 aa  40.4  0.009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
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