Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2043 |
Symbol | |
ID | 7858663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2323532 |
End bp | 2323804 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643866137 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_002882060 |
Protein GI | 229820534 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.529768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00243953 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGGAA CCGTCGCTGC CCCCGAGGGC ATCACCGATC CGCCCATCGA CGAGCTGCTC ACCGCTGCCG ACTCGAAGTA CGCGCTCGTG ATCTACGCCG CGAAGCGCGC GCGTCAGATC AACGCGTACT ACGCGCAGCT GAACGAGGGC CTGCTCGAGT ACGTCGGCCC GCTCGTCGAG ACCCGTAACC AGGAGAAGCC CCTCTCCATC GCGATGCGCG AGATCAACAA GGGCCTGCTC ACGGTCGAGG CCACCGAGAG CACCGAGGAC TGA
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Protein sequence | MSGTVAAPEG ITDPPIDELL TAADSKYALV IYAAKRARQI NAYYAQLNEG LLEYVGPLVE TRNQEKPLSI AMREINKGLL TVEATESTED
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