Gene Rxyl_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1472 
Symbol 
ID4116138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1492331 
End bp1492651 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content71% 
IMG OID638036264 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_644246 
Protein GI108804309 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAACG ACCTGAAGAT CGAAGAGCTT CTGGACAAGG TGGACTCCCG CTACGGGCTG 
GTCGTGGCTA CGGCCAAGCG GGCCCGCCAG ATAAACGAGT ACACCGCCAC CCTGGGCCTG
AACGAGTCCC TGGGCATCCC CGGTCCCCAG GTGCACACCC GCTCCCAGCA CCCCCTCACC
ATCGCCATCG AGGAGCTGCG GGCCGGCAAG CTGAAGGTCG GCTTCCGCGA GCCGGCCCGC
GAGGCCGCGG AGCCCGCCGG GGAGGCCCCC GAGGAGCAGC AGCGGGCCGC CGGGGAGAGG
GAGGACCAGG GCGCGGCTTG A
 
Protein sequence
MLNDLKIEEL LDKVDSRYGL VVATAKRARQ INEYTATLGL NESLGIPGPQ VHTRSQHPLT 
IAIEELRAGK LKVGFREPAR EAAEPAGEAP EEQQRAAGER EDQGAA