Gene Ksed_12730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12730 
Symbol 
ID8372781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1313897 
End bp1314322 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content69% 
IMG OID644991550 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_003149070 
Protein GI256825110 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0393842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0422881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA CCAAGGCCGC CCCCATCGGC GTGACCAACC CGCCCATCGA CGACCTGCTC 
CAGCACGTCG ACTCCAAGTA CGCCCTGGTG ATCTACTCCG CCAAGCGGGC CCGCCAGATC
AACGCGTACT ACGCGCAGCT CAAGGAGGGC CTGCTCGAGT ACGTCGGCCC GCTGGTGGAG
GCCGAGGCGT CCGACAAGCC GCTGTCGATC GCCCTGCAGG AGATCAACGC CGACAAGCTC
GTGCGCACCG TCGGCCACGA CATCCCCGAG GTCGGCACGC CCGGCATGCC CGCGGAGCAG
CCCGAGGCGA TCACCCCCGT CACCGAGGAG GCCGACGAGG TCGCCCCGGC CGAGGACGTG
GACGTCATGC AGGACGTCGA GGAGAACACT GCCGACGCGC CCGAGAACGG CACCGACGAG
TCCTGA
 
Protein sequence
MSGTKAAPIG VTNPPIDDLL QHVDSKYALV IYSAKRARQI NAYYAQLKEG LLEYVGPLVE 
AEASDKPLSI ALQEINADKL VRTVGHDIPE VGTPGMPAEQ PEAITPVTEE ADEVAPAEDV
DVMQDVEENT ADAPENGTDE S