10 homologs were found in PanDaTox collection
for query gene MADE_00297 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00297  hypothetical protein  100 
 
 
701 aa  1453    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0243  hypothetical protein  27.71 
 
 
509 aa  166  2.0000000000000002e-39  Brucella ovis ATCC 25840  Bacteria  normal  0.674727  n/a   
 
 
-
 
NC_008781  Pnap_2652  hypothetical protein  25 
 
 
813 aa  152  2e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.442336  normal 
 
 
-
 
NC_007908  Rfer_1359  hypothetical protein  23.48 
 
 
542 aa  145  3e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.780516  n/a   
 
 
-
 
NC_007908  Rfer_2834  hypothetical protein  22.94 
 
 
520 aa  141  4.999999999999999e-32  Rhodoferax ferrireducens T118  Bacteria  normal  0.127283  n/a   
 
 
-
 
NC_008321  Shewmr4_3216  hypothetical protein  22.08 
 
 
655 aa  99  2e-19  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.0000000265804 
 
 
-
 
NC_008345  Sfri_2603  hypothetical protein  25.54 
 
 
517 aa  88.6  4e-16  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0989  P4 alpha zinc-binding domain protein  24.1 
 
 
866 aa  61.2  0.00000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0963  hypothetical protein  22.65 
 
 
515 aa  59.7  0.0000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_03470  hypothetical protein  21.85 
 
 
815 aa  54.3  0.000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
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