Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2652 |
Symbol | |
ID | 4689413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2790566 |
End bp | 2793007 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835660 |
Product | hypothetical protein |
Protein accession | YP_982875 |
Protein GI | 121605546 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.442336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACA CCCTGGAGCA ATTCCGCCAA GCCATCACGG CAGCGGGCAT TGAAGCGCCT GACGACATTC ACGACGATGG CGCAATCCAC CGCTTCAGCC CCAGCGGCCG GGGCAGCGAC AAGGCGGCCT GGTACATGCT GCACACGGAT GGCATCCCGG CTGGTGCGTT CGGTGACTGG CGTAGCGGCC TGCAATCGAC CTGGTGCGCC AAGTCCGACA GCGCCATGAC GGCGACAGAG CTGGCTGACC ACCGGCAGCG CGTCAAGGCC ATGAAGGCAC AGCGCGACGC TGATCTACTG GCCACCCAGC AACAGGCCAG CGCGACGGCG GCGGCATTGC TGGCGCAGGC GGACGCGGCA ACAGCGCATC CTTACTTGAG CGCCAAAGGC GTGAAGGGCC ACGGATTGAA GGTGTTCAGC GACAAGCTCC TGATCCCCAT GCGCGACACG GCCGGCAAGC TGCACAGCCT GCAGGCCATC ACGCCGGACG GCGAGAAGCG CTTTCACCCG GGCGGGCGCA TCAAGGGCTG CTATCACTCG ATTGGTAAAC CGGCGGGCCG TCTGGTCATC GCGGAAGGCT ACGCCACGGC GGCGAGCATC CATGAAGCCA CGGGCGACGC GGTGGCCGTG GCCTTCAACG CGGGCAACCT TGAAGCCGTG GCGCTGGCCC TGCGCGCCAA GTACCCGGCG CTGGTGCTGA TCGTGGCGGC CGATGACGAC CACCTGACCG ACGGCAATCC CGGACTGAGC AAAGGCACGG CGGCGGCGCT GGCCGTGGGC GGGCTGGTGG CCGTGCCATC GTTCCCGGCG GGCAGGCCCG ACAAGGCGAC GGACTTTAAC GACCTGGCCG TAATAGCGGG GCTGGACGCG GTGAAGGCCT GCATGGATGC TGCTATCGAA TCAGTAGCTA CCCATGCAGG CAGCGCAAGC GCAACAGGCC AGATTGACCT ATGGCCTGAG CCTACGCCCT TGCCCAATGC CTTGCCCCCG GTGCAGGCCT TTGACGCCGA CTTGCTGCCC GTGGCCCTGC GGGGCTGGGT GATGGACATT GCGCACCGGA TGCAATGCCC GCCAGACTTC CCGGCAGTCG CCGCGCTGGT GGCGCTATCG AGCCTGATCG GGGCGCGCGC CGTGGTGCAG CCCAAGGCGC GGGATGACTG GCAGGTTGTG CCGAACCTGT GGGGCATGAC CATAGGCAGG CCGGGCGTGA AGAAAAGCCC GGCGCTCAGC GAAGCCTTGA AGCCGCTCAA CCGACTGCAG GCCGATGAGT TCGAGCTGCA CCAAGCCGCG CATGACGCCT GGGAACTGGA CTGCAAGGTA TCCGCCATGC AGGACAATGC CAACGAGAAA AGGGCAAAGG GGCTGGCCGG TAAAGACCCG GCGGCGGCGC GCGCCCTGTT GGAGCCGGTG GTCCTGCCTG CCGAACCCAC GGCGCGGCGC TACACCGTCA ACGATGCGAC GGTGGAAAAG CTGGGCGAGC TGCTGATGCA CAACCCGTGG GGCACCTTGT CCTACCGGGA TGAGCTGTAC GGCCTGCTGA CCGGCCTGGA CAAGCAGGGG CAAGAGGGTT CACGGGCTTT CTACCTGCAG AGCTATGACG GGAATCAGGG CTACACCTTT GACCGCATCG GGCGCGGAAC GACGCACATC CCGCGTGTGT GCCTGGCGAT GATCGGGGGC ATCCAGCCGG GCCGGATTCA GGAATACGTG CGCGGCGCGG TGGCCGGTGG CAGCGCAGAC GATGGTCTGC TGCAACGCTT TGGGCTGGCC GTCTGGCCGG ACACGGGCGG CGAGTATGTC CACGTTGACC AGTGGCCCGA CACGCCGGCC AAGCAAGCTG CATGGGCGGT GTTCGAGCGC CTGGCCGCAT TGCAGCCGGC GAGTGACCTG GACGCGACCG TCTGGCGCTT TGACGATGAC GCGCAAGCCC TGTTCGTGGA GTGGCTGATC CCGTTTGAAA ACGAGATACG CGGCGACGAA CTGCACCCGG CGATGGTGTC GCACCTGTCC AAGTACCGCA AGCTGATCCC GGCGCTGGCG CTGGTGTTCG CCATGATCGA CACACCGGAG GGCGGCGTGA TCCATGAGCC TGAGCTGCTG CGGGCGCTGG CCTGGGGCGA CTACCTGCGC ACCCATGCCA GCCGGCTGTA CGCGGCGGCG GTGACACCGG AAACCACGGG CGCGGCGGCG CTGCTGGTCA AGATCAGGGC GGGCAAGCTG GCCGACAAGG ATGGCGTGAT TCTGGACAGC TTCACCCCCC GGCAGGTGGC TATCAAGCAT TGGGCCGGAC TGGACACGCC CGACGCCGTG CGCAAGGCAG CGGACGTGCT GGCGGACTTC GATTGGTTGC GCCGGGAGGT GGTGCAGTCT GGCGATGCAT TGGGCCGGGG CAGACCGAGC GACCGCTACA CCATCAATCC GAGGGCAAGG GGCGCGGCAT GA
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Protein sequence | MNDTLEQFRQ AITAAGIEAP DDIHDDGAIH RFSPSGRGSD KAAWYMLHTD GIPAGAFGDW RSGLQSTWCA KSDSAMTATE LADHRQRVKA MKAQRDADLL ATQQQASATA AALLAQADAA TAHPYLSAKG VKGHGLKVFS DKLLIPMRDT AGKLHSLQAI TPDGEKRFHP GGRIKGCYHS IGKPAGRLVI AEGYATAASI HEATGDAVAV AFNAGNLEAV ALALRAKYPA LVLIVAADDD HLTDGNPGLS KGTAAALAVG GLVAVPSFPA GRPDKATDFN DLAVIAGLDA VKACMDAAIE SVATHAGSAS ATGQIDLWPE PTPLPNALPP VQAFDADLLP VALRGWVMDI AHRMQCPPDF PAVAALVALS SLIGARAVVQ PKARDDWQVV PNLWGMTIGR PGVKKSPALS EALKPLNRLQ ADEFELHQAA HDAWELDCKV SAMQDNANEK RAKGLAGKDP AAARALLEPV VLPAEPTARR YTVNDATVEK LGELLMHNPW GTLSYRDELY GLLTGLDKQG QEGSRAFYLQ SYDGNQGYTF DRIGRGTTHI PRVCLAMIGG IQPGRIQEYV RGAVAGGSAD DGLLQRFGLA VWPDTGGEYV HVDQWPDTPA KQAAWAVFER LAALQPASDL DATVWRFDDD AQALFVEWLI PFENEIRGDE LHPAMVSHLS KYRKLIPALA LVFAMIDTPE GGVIHEPELL RALAWGDYLR THASRLYAAA VTPETTGAAA LLVKIRAGKL ADKDGVILDS FTPRQVAIKH WAGLDTPDAV RKAADVLADF DWLRREVVQS GDALGRGRPS DRYTINPRAR GAA
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