Gene Pnap_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0963 
Symbol 
ID4690136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1015611 
End bp1017158 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content66% 
IMG OID639833961 
Producthypothetical protein 
Protein accessionYP_981201 
Protein GI121603872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA CTGACTTCAA CGACCTGGCT GCGATGGCGA GCATCGAGGA CGTGCAGCGG 
CAAATTGCGC AAGCCGTGCC TGCGGTGGAG CCGCCCGTCT GGCCGGACCC CATCCTGCCG
GGCACGCTGC GCACGCCGCC GATACCGCCC GAGGTACTGC CGTCCTGGCT GGCTGACATG
GCGCGGGCCG TGTCGGAAAG CACGCAGACG CCGCCCGCGC TGGCGGTGAT GTGCGGCCTG
GCCGTGCTGG CGACAGTCCT GCAGCGCCGG TTCGAGGTCT CCCCTTTCGG TGACAGCTAC
ACCGAGCCGC TGGCGCTGTG GACCCTGAGC GCATCCCCCA GCGGGACGCG CAAGAGCGCC
GTATTGAATG CCATGCTGGG GCCGCTGCTG CACTGGGAAA AGCTGCTGCG CGACCGCATG
CGCAGGGACA TTGCCAAGGT CAACGCAACG CGGGCCGTGG CGAAAAAGCG CGTCGAGCGG
CTGCTGCAGG ACGCGGCCAA GGCCAAGGAA CCCAGCGAGC GCGAAGCCAT CCGGGCCGAG
GTCGAGCGCG AAGAAACCGA GATGCCCGAG GAAATCCGGG CACCACGGCT GTTCACGGGT
GATACCACGG CTGAGCGGCT GCAGGCGATG CTGGTCGAGC ATGGCGAGCG CATGGCGGTG
CATTCGGACG AGGCCGGAAT CTTCCTCATC ATGGCCGGTA TCTACAACGG CGGCGCGGCG
AATATCGACG TGTTCCTGCA GGGCCATGCG GGTTCGGCCA TGCGCGTTGA CCGGGCCGGG
CGCTCTGCCC ATGTGGACAA ACCGGCGCTG TCCTTTGGGC TCTTGATACA GCCGGACGTC
ATGTCCGAGG TGGCGGGGTC GTCACGCTTC CGAGGCTCTG GCCTGCTGGC GCGATTCCTA
TACGCCATGC CGGCGAGCAA CGTGGGCAAG CGCGACGTGC GCAGGCACAC GCCCATTCCC
GAGGAGGTGG CCGACGAATA TAAGCTGTAC CTGCTCAGCC TACTGCAGGG CGTGCCTGGC
GCGGTGGAAG CGCCCAAGGT GCTGACCTTG TCCGAGGCGG CGCGGGATGT GTGGCTTGAC
TTGGCCGAGG AGATCGAGCA CCAGCAAGGT GAAGGTGGGC GCTATGAATC CATCAGCGAC
TGGACCAGCA AGCTGCCCGG CGCGGTGGCT CGTATTGCGG CGCTGCTTGA GCTGGCTGAG
ACCGGGCTGG ATGCTGTCGA GGTCAGCCAT GCCTCAATGG ACCGGGCGCT ACGCCTGGGG
CGGCTGCTGA TACCCCATGC GCAGGCCGCG TTCGGGCTGC TGGGCACTGA TGCCGTGGAT
AGTGATGCGG TGGCCGTCCT CAAGTGGATG CAAGCGCGTG CTGAGCCTGA GTTCACCAGG
TCCCAAGCGC AGAAGGCGCA GGAGGGGCGC TTTCGCAGCG TGGACCGGCT GCAGAAGGCG
CTGGAACGCC TGGAGCAACA GGATGTGCTG CGAGGCTACA AGCGCCGCAA TAAGGGAACA
GGGCCAAGCA TGGTCTATGT CGTCAATCCC AAGGTGTTTG AGATATAG
 
Protein sequence
MNATDFNDLA AMASIEDVQR QIAQAVPAVE PPVWPDPILP GTLRTPPIPP EVLPSWLADM 
ARAVSESTQT PPALAVMCGL AVLATVLQRR FEVSPFGDSY TEPLALWTLS ASPSGTRKSA
VLNAMLGPLL HWEKLLRDRM RRDIAKVNAT RAVAKKRVER LLQDAAKAKE PSEREAIRAE
VEREETEMPE EIRAPRLFTG DTTAERLQAM LVEHGERMAV HSDEAGIFLI MAGIYNGGAA
NIDVFLQGHA GSAMRVDRAG RSAHVDKPAL SFGLLIQPDV MSEVAGSSRF RGSGLLARFL
YAMPASNVGK RDVRRHTPIP EEVADEYKLY LLSLLQGVPG AVEAPKVLTL SEAARDVWLD
LAEEIEHQQG EGGRYESISD WTSKLPGAVA RIAALLELAE TGLDAVEVSH ASMDRALRLG
RLLIPHAQAA FGLLGTDAVD SDAVAVLKWM QARAEPEFTR SQAQKAQEGR FRSVDRLQKA
LERLEQQDVL RGYKRRNKGT GPSMVYVVNP KVFEI