17 homologs were found in PanDaTox collection
for query gene Lcho_0871 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0871  type IV secretory pathway VirB3 family protein  100 
 
 		 110 aa  220  4.9999999999999996e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010515  Bcenmc03_4201  type IV secretory pathway VirB3 family protein  41 
 
 		 106 aa  80.5  0.000000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_4852  type IV secretory pathway, VirB3-like  39.18 
 
 		 112 aa  75.9  0.0000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_3314  type IV secretory pathway, VirB3 family protein  39.18 
 
 		 106 aa  75.9  0.0000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_0162  type IV secretory pathway VirB3 family protein  37.11 
 
 		 110 aa  75.1  0.0000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004311  BRA0067  type IV secretion system protein VirB3  37.25 
 
 		 116 aa  72.4  0.000000000002  Brucella suis 1330  Bacteria  decreased coverage  0.00447561  n/a   
 
 
-
 
NC_009504  BOV_A0061  type IV secretion system protein VirB3  37.25 
 
 		 128 aa  72.4  0.000000000002  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_6505  type IV secretory pathway VirB3 family protein  37.76 
 
 		 114 aa  69.7  0.00000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007953  Bxe_C0449  putative type IV secretion system protein VirB3/TraD  33.67 
 
 		 110 aa  67.4  0.00000000006  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010509  Mrad2831_6324  type IV secretory pathway VirB3 family protein  33.66 
 
 		 113 aa  67  0.00000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  1 
 
 
-
 
NC_007951  Bxe_A1755  putative type IV secretion system protein VirB3/TraD  36.73 
 
 		 106 aa  66.2  0.0000000001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.958773 
 
 
-
 
NC_007951  Bxe_A2656  putative type IV secretion system protein VirB3/TraD  36.73 
 
 		 106 aa  65.9  0.0000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.556613  normal  1 
 
 
-
 
NC_011071  Smal_2442  type IV secretory pathway VirB3 family protein  33.33 
 
 		 102 aa  48.1  0.00004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.79385 
 
 
-
 
NC_012040  Cla_a009  secretion/conjugal transfer ATPase VirB3/4  27.55 
 
 		 924 aa  46.2  0.0001  Campylobacter lari RM2100  Bacteria  normal  1  n/a   
 
 
-
 
NC_010657  SbBS512_0037  triC protein  30.77 
 
 		 915 aa  45.8  0.0002  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1136  type IV secretory pathway VirB3 family protein  34.31 
 
 		 116 aa  43.9  0.0008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008790  CJJ81176_pTet0028  cmgB3/4  24.75 
 
 		 922 aa  42.7  0.002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
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