| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_1136 |
|---|
| Symbol | |
|---|
| ID | 7296533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 1268457 |
|---|
| End bp | 1268807 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643593923 |
|---|
| Product | type IV secretory pathway VirB3 family protein |
|---|
| Protein accession | YP_002491547 |
|---|
| Protein GI | 220916243 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3702] Type IV secretory pathway, VirB3 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCGC GATTTCCGCT CTTCAAGGGT GCGACCCGGG TGCCGACCGT AGCCGGCGTC
CCGCTCATCC CGGCGGTCGT GCTCGTCATC ACCGTGGCCA GCGCGACCGT GTTGCTGGGC
TTCAGCTGGC TCGCGCTCCT CGCCCCGGGC TGGCTCCTCA TGGCCCAGGT GACGCGCACC
GACGATCGGG CGTTCCGGAT CCTGTGGCTC TGGGCGCAGA CGAAAGTTGC GAATCGCCTG
CGCCTCGGCG CTCGGCGCGG CGTCCACGAT CTCTGGGGCG CCTCGGCCTA CGCGACCTCC
GACCGCCGTT TCCGGAGCTG GGAAGGAAGG AGCAGCCGAT GGGCCGGGTG A
|
|---|
| Protein sequence | MAARFPLFKG ATRVPTVAGV PLIPAVVLVI TVASATVLLG FSWLALLAPG WLLMAQVTRT
DDRAFRILWL WAQTKVANRL RLGARRGVHD LWGASAYATS DRRFRSWEGR SSRWAG
|
|---|
| |