Gene Smal_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2442 
Symbol 
ID6476932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2747632 
End bp2747940 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID642731630 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_002028828 
Protein GI194366218 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3702] Type IV secretory pathway, VirB3 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.79385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATAAGA ATGTCGTGTT CCGCGGCTGC ACGCGTCCAG CGATGTTCCT GGGCGTGCCC 
TACCTGCCAT TCTTCATGGT GGCAGGCGGG CTGTTGCTGC TCAGCATGTA CACGAACTTC
TGGTTCCTGC TCACCATTCC GGTGGCGGTC TTCATCATGC GGCACATGGC CAAGCGTGAC
GAAATGATCT TCCGGCTGCT GGGCCTGCGC CTGATGTTCA AGCTGAAGGT GCGCAACGTG
CAGGAGCACG ATGGCATGTG GGTGCTCAAC CCCAACCATT ACCGCAACAA GCCGGCCCGA
ATGGATTGA
 
Protein sequence
MHKNVVFRGC TRPAMFLGVP YLPFFMVAGG LLLLSMYTNF WFLLTIPVAV FIMRHMAKRD 
EMIFRLLGLR LMFKLKVRNV QEHDGMWVLN PNHYRNKPAR MD