32 homologs were found in PanDaTox collection
for query gene Lcho_0075 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_0075  holo-ACP synthase, malonate decarboxylase-specific  100 
 
 		 253 aa  491  9.999999999999999e-139  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012792  Vapar_5370  holo-ACP synthase, malonate decarboxylase-specific  48.9 
 
 		 229 aa  181  1e-44  Variovorax paradoxus S110  Bacteria  normal  0.0548916  n/a   
 
 
-
 
NC_010002  Daci_1764  holo-ACP synthase, malonate decarboxylase-specific  44.64 
 
 		 237 aa  155  5.0000000000000005e-37  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010084  Bmul_2046  phosphoribosyl-dephospho-CoA transferase  42.13 
 
 		 222 aa  120  3e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1847  malonate decarboxylase  39.56 
 
 		 231 aa  118  7.999999999999999e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.705884  n/a   
 
 
-
 
NC_010508  Bcenmc03_1245  phosphoribosyl-dephospho-CoA transferase  40.81 
 
 		 222 aa  117  1.9999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0753275 
 
 
-
 
NC_008060  Bcen_0792  phosphoribosyl-dephospho-CoA transferase  40.37 
 
 		 222 aa  113  2.0000000000000002e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.147641  n/a   
 
 
-
 
NC_008542  Bcen2424_1273  phosphoribosyl-dephospho-CoA transferase  40.37 
 
 		 222 aa  113  2.0000000000000002e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0280828  n/a   
 
 
-
 
NC_010551  BamMC406_1163  phosphoribosyl-dephospho-CoA transferase  41.56 
 
 		 222 aa  114  2.0000000000000002e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.707422  normal  0.167545 
 
 
-
 
NC_007510  Bcep18194_A4416  phosphoribosyl-dephospho-CoA transferase  41.98 
 
 		 232 aa  110  3e-23  Burkholderia sp. 383  Bacteria  normal  0.356238  normal  1 
 
 
-
 
NC_008390  Bamb_1151  phosphoribosyl-dephospho-CoA transferase  42.47 
 
 		 222 aa  106  4e-22  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_4016  malonate decarboxylase  36.24 
 
 		 222 aa  92  9e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_4290  hypothetical protein  37.78 
 
 		 209 aa  88.2  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0171  hypothetical protein  35.91 
 
 		 219 aa  87  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.846138 
 
 
-
 
NC_011666  Msil_3188  holo-ACP synthase, malonate decarboxylase-specific  37.23 
 
 		 245 aa  86.7  4e-16  Methylocella silvestris BL2  Bacteria  n/a    normal  0.605974 
 
 
-
 
NC_008825  Mpe_A0790  malonate decarboxylase  37.7 
 
 		 229 aa  84.7  0.000000000000001  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00220342  normal  1 
 
 
-
 
NC_011894  Mnod_3155  holo-ACP synthase, malonate decarboxylase-specific  33.78 
 
 		 218 aa  83.6  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1077  phosphoribosyl-dephospho-CoA transferase  37.56 
 
 		 213 aa  82  0.000000000000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0050  hypothetical protein  34.55 
 
 		 219 aa  79  0.00000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.390549  normal  0.0698555 
 
 
-
 
NC_007651  BTH_I2799  phosphoribosyl-dephospho-CoA transferase  38.51 
 
 		 294 aa  77.4  0.0000000000002  Burkholderia thailandensis E264  Bacteria  normal  0.0976082  n/a   
 
 
-
 
NC_010511  M446_6853  hypothetical protein  34.18 
 
 		 218 aa  77  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009080  BMA10247_0543  phosphoribosyl-dephospho-CoA transferase  37.16 
 
 		 308 aa  76.6  0.0000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.39768  n/a   
 
 
-
 
NC_006348  BMA3033  phosphoribosyl-dephospho-CoA transferase  37.16 
 
 		 308 aa  76.6  0.0000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.623128  n/a   
 
 
-
 
NC_009076  BURPS1106A_1486  phosphoribosyl-dephospho-CoA transferase  37.16 
 
 		 308 aa  76.6  0.0000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.876381  n/a   
 
 
-
 
NC_009074  BURPS668_1456  phosphoribosyl-dephospho-CoA transferase  37.58 
 
 		 308 aa  76.6  0.0000000000003  Burkholderia pseudomallei 668  Bacteria  normal  0.0184396  n/a   
 
 
-
 
NC_007434  BURPS1710b_1587  phosphoribosyl-dephospho-CoA transferase  37.16 
 
 		 307 aa  76.6  0.0000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A0610  phosphoribosyl-dephospho-CoA transferase  36.99 
 
 		 296 aa  76.3  0.0000000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.785994  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1260  phosphoribosyl-dephospho-CoA transferase  36.99 
 
 		 296 aa  76.3  0.0000000000005  Burkholderia mallei SAVP1  Bacteria  normal  0.199636  n/a   
 
 
-
 
NC_011757  Mchl_0029  holo-ACP synthase, malonate decarboxylase-specific  34.27 
 
 		 219 aa  72.8  0.000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0520843  normal  1 
 
 
-
 
NC_010172  Mext_0028  hypothetical protein  33.33 
 
 		 218 aa  72  0.000000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.920505  normal  1 
 
 
-
 
NC_006368  lpp2496  hypothetical protein  29.02 
 
 		 207 aa  60.5  0.00000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007204  Psyc_1142  putative malonate decarboxylase, subunit E  26.36 
 
 		 234 aa  57.8  0.0000002  Psychrobacter arcticus 273-4  Bacteria  normal  0.0172841  normal  0.360178 
 
 
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