Gene Daro_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4016 
Symbol 
ID3567188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4315684 
End bp4316352 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID637682489 
Productmalonate decarboxylase 
Protein accessionYP_287213 
Protein GI71909626 
COG category 
COG ID 
TIGRFAM ID[TIGR03135] holo-ACP synthase, malonate decarboxylase-specific 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC ACGACCTCGT CTATCTGCAG CGCGATGCCT TGTTCTCGAC CCCTTGTGCG 
GAAACAGGCG ATCCCTACTG GCAGGCTGCA GGTGACTGGA TCGCGGCCGG CCGGCCGCTG
GTGGCTGCCC GCCAGCCGGT GGACTGCGAG TGCCTGCTTC TCGGTTTGAG TCTGCCGTCG
GCATTGCAGC GAAAGAGGCT GTCCATCACT GTCGATCATG GCGCCGTGGC CAGGGTTTGC
TCGCCACTCT CGCTCAGGCA TTGCTTGCCC CTCTTGCCAG CGGCCCAGGT CGAAATTTTA
CGCCGGCTGG ATGTCGGGGC TGCCGCCTGC TCGGTACGCC TCGGCGTTTT CGGCTCACTG
GCCTGGGAGG CACTGAGCGG CGAAAGCTAT CGCCATGCCG AATCCGATAT CGACCTGATC
TGCGATATCG CCACGCCGGA GCAATTCGAT TGCATGCTGA GCTTGCTGCA ACAGGCGGCC
GACGCCTTGC CCTGCCGGCT CGATGGCGAA ATGCGCTTTC CCGATGGCGC TGCCGTTGCC
TGGCGGGAGC TTGCTGCACA ACGCTGGCAG CCGGCCGCAC AGGTGCTGGT CAAGGGGGAG
CGTGAAGTCG GGCTGCGACC CTTGCAGCAT CTGCTGGCCA GCCTGAAGGA GGAATGCTGT
CATGCTTGA
 
Protein sequence
MRRHDLVYLQ RDALFSTPCA ETGDPYWQAA GDWIAAGRPL VAARQPVDCE CLLLGLSLPS 
ALQRKRLSIT VDHGAVARVC SPLSLRHCLP LLPAAQVEIL RRLDVGAAAC SVRLGVFGSL
AWEALSGESY RHAESDIDLI CDIATPEQFD CMLSLLQQAA DALPCRLDGE MRFPDGAAVA
WRELAAQRWQ PAAQVLVKGE REVGLRPLQH LLASLKEECC HA