Gene Rfer_1847 details

Gene Information

• Locus tag: Rfer_1847
• ID: 3963022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 1985113
• End bp: 1985808
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637916667
• Product: malonate decarboxylase
• Protein accession: YP_523104
• Protein GI: 89900633
• TIGRFAM ID: [TIGR03135] holo-ACP synthase, malonate decarboxylase-specific

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.705884
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCT TGGCGCGTAA CCAACTGGTG TGGCTTGACG CACAGGCTTG GGCGCAGATG 
CAAGCGCATC CTTGGGACGA TGAGGCGCAG CACATTCTTG CGCATTGGCG AAGTACCAGT 
TTGCCGCTGG TGGTGTGCCG CCAGCGCGTT GAAGCCGCGC CAGATCAGAT TTGCCTGGGT 
TTGCCGGCCC CCCAACATTG GTCCAGGCGG CGCCTGGCGC TGACGGCGCG CCTGGATCAG 
GTCCTTGCCT TTGGGGTCTT TCCTACGCTG TTTCAAGTCG CGCACGCCTG CCATTGGGGG 
CCAGCCGCGC TGGATCTGGA CCTGGCGCTG TCCAACTGGG GTGTGACGGT CCATGTCTAT 
GGTTCCCATG GTTGGCAGTT CCTCACCAAC ATGCCCTACT TGCATGACGG TTCAGACCTT 
GACTTGAGCC TGGCGGTGCC TGATTTTCAG ACGGCGTGTC GGGTACAGGC GCAGCTGGCT 
GAAGTGGAGC TTGGGCGGCG GCTGGATGGT GAAATTGTCT TCCCAGGCGG GCAAGCCGTC 
GCCTGGCGGG AGCTGCAACG GCTGGTGACA GGGCAGACCT CGCAGGTCTT GCTGAAAGAC 
CGCCAAAACA TCCGGCTGGC AACCCTGGCA GAGGTGCAAG AGTTGGGCGC TTGTGCACCG 
CAAGACGTAG CCGAAACGGC TCTGGCGTTG CCCTGA 

 

Protein sequence

MKVLARNQLV WLDAQAWAQM QAHPWDDEAQ HILAHWRSTS LPLVVCRQRV EAAPDQICLG 
LPAPQHWSRR RLALTARLDQ VLAFGVFPTL FQVAHACHWG PAALDLDLAL SNWGVTVHVY 
GSHGWQFLTN MPYLHDGSDL DLSLAVPDFQ TACRVQAQLA EVELGRRLDG EIVFPGGQAV 
AWRELQRLVT GQTSQVLLKD RQNIRLATLA EVQELGACAP QDVAETALAL P