13 homologs were found in PanDaTox collection
for query gene Hoch_3390 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013440  Hoch_3390  Biopolymer transport protein ExbD/TolR  100 
 
 		 187 aa  372  1e-102  Haliangium ochraceum DSM 14365  Bacteria  normal  0.170146  normal  0.328506 
 
 
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NC_009483  Gura_3071  hypothetical protein  23.12 
 
 		 166 aa  52.4  0.000004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_011901  Tgr7_0537  sigma-70 factor  29.51 
 
 		 170 aa  52.4  0.000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.513194  n/a   
 
 
-
 
NC_008825  Mpe_A1230  adventurous gliding motility protein S  31.72 
 
 		 163 aa  48.9  0.00005  Methylibium petroleiphilum PM1  Bacteria  normal  0.096115  normal  1 
 
 
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NC_007912  Sde_3561  sigma-70 factor  26.11 
 
 		 178 aa  46.2  0.0003  Saccharophagus degradans 2-40  Bacteria  normal  0.373178  normal  0.402899 
 
 
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NC_008740  Maqu_1596  biopolymer transport protein  26.97 
 
 		 162 aa  45.8  0.0003  Marinobacter aquaeolei VT8  Bacteria  normal  0.756839  n/a   
 
 
-
 
NC_007760  Adeh_4308  adventurous gliding motility protein S  28.29 
 
 		 194 aa  43.5  0.002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2229  inner membrane protein  25.73 
 
 		 141 aa  43.5  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.243191  normal  0.205918 
 
 
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NC_010524  Lcho_0478  biopolymer transport protein ExbD/TolR  25.45 
 
 		 146 aa  43.1  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
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NC_011891  A2cp1_4463  Biopolymer transport protein ExbD/TolR  28.29 
 
 		 194 aa  43.1  0.002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.272834  n/a   
 
 
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NC_008740  Maqu_1808  biopolymer transport protein ExbD/TolR  23.94 
 
 		 166 aa  42.7  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  0.712122  n/a   
 
 
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NC_011145  AnaeK_4444  adventurous gliding motility protein S  28.29 
 
 		 194 aa  43.1  0.003  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
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NC_010581  Bind_0234  TonB system transport protein ExbD  25.61 
 
 		 177 aa  42.4  0.004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.617554 
 
 
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