Gene Tgr7_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0537 
Symbol 
ID7317885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp568811 
End bp569323 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID643615422 
Productsigma-70 factor 
Protein accessionYP_002512621 
Protein GI220933722 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.513194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGT CCCGCCGTGC CCGCCGCATG GAGCGGCATC ATCTGCGCGC CAAACGGGTG 
CCCGGATTCA ATCTGGTGGC GCTCATGGAC ATCTTCACCA TCCTGGTGTT CTTCCTGCTG 
GTGAACTCCA CCGACGTGCA GGAGATCCCC AGCACCCGGG CCGTGGAACT GCCCGAGTCC 
GTGGCTGAAA CCGTGCCACG CGAGGCCCTG ATCGTCACCG TGTCCCAGGA CGCCATCCTG 
GTGGCCGGTC GACAGGTGAG CACCGTCGTC GAGGCCGAGC AGAGCGAGGG ACTGGTGATC 
GAGACCCTGC GCGTCGCGCT CGAGCAGCAC GGCCGGCGCG GGCTGCTGCG CCGCGAGGAC 
GACGAGGACC TGGGTGCCAT CACCATCATG GGCGACAGGC AGATCCCGTT CAGCCTGCTC 
AAGAAGGTGA TGGCCACCTG CACCGAGGCG GGCTTCAGCC AGGTCTCCCT GGCCGTGCAC 
CAGACGACGC AAACCGCAGG TGGTGGCTCA TGA
 
Protein sequence
MKMSRRARRM ERHHLRAKRV PGFNLVALMD IFTILVFFLL VNSTDVQEIP STRAVELPES 
VAETVPREAL IVTVSQDAIL VAGRQVSTVV EAEQSEGLVI ETLRVALEQH GRRGLLRRED 
DEDLGAITIM GDRQIPFSLL KKVMATCTEA GFSQVSLAVH QTTQTAGGGS