| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3390 |
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| Symbol | |
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| ID | 8545778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4687181 |
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| End bp | 4687744 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646388057 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_003267785 |
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| Protein GI | 262196576 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.170146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.328506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCG CACGCGAAGC CCGCGCCATC GTCCGCAAGG CGATCAAGCG CGTCCCCGAG
GGCGAGGAGA TCCGCCACCT CAACATCATG CCGATGATGG ACATCATGAC CATCCTGCTG
GTGGCGTTCA TCTTCCAGGC CGCGGTGGGC GCGGCCGCGG TCACGGCCGC GAGCGTGGAC
CTGCCCAGCT CGGTGTCGCA GGAGCCCATG CCCGAGGCGG CCTCGATCGT CATCGTCTCG
CCCGAGGCCA TCAGCGTCGA GGATCAGCAG ATCGTGCCGC TGCACGGCGG CGAGGTCGAT
CCCTCGCTCA AGGAGGGCGG CGCGCTGGGC GTGGCCATCC CCAAGCTGAC CAAGTTTTTG
GCCGCGTGGC GCCAGAGCAA CGAGGCCGAG ATGCGGGCCA AGGGCAAGAC CGTGCCCGAT
ATCCCGGAGC TGATGATCAT CGCCGACCGC TCGGTGCCCT ATCGCCTGCT GTATCAGGTG
ATCTACAGCG CCAAGCAGAA GGAAGCCGGC TACAAGCGCT TCCGCCTGAT CGTCCTCAAG
TACGAGCCCG GCATGGCCAG GTGA
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| Protein sequence | MISAREARAI VRKAIKRVPE GEEIRHLNIM PMMDIMTILL VAFIFQAAVG AAAVTAASVD
LPSSVSQEPM PEAASIVIVS PEAISVEDQQ IVPLHGGEVD PSLKEGGALG VAIPKLTKFL
AAWRQSNEAE MRAKGKTVPD IPELMIIADR SVPYRLLYQV IYSAKQKEAG YKRFRLIVLK
YEPGMAR
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