37 homologs were found in PanDaTox collection
for query gene Hlac_2107 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012029  Hlac_2107  Cobalamin-independent synthase MetE domain protein  100 
 
 		 333 aa  664    Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.133546  normal  0.0920246 
 
 
-
 
NC_013743  Htur_2395  Cobalamin-independent synthase MetE domain protein  65.47 
 
 		 347 aa  422  1e-117  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2668  Cobalamin-independent synthase MetE domain protein  65.17 
 
 		 331 aa  406  1.0000000000000001e-112  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013922  Nmag_1090  Cobalamin-independent synthase MetE domain protein  64.78 
 
 		 348 aa  395  1e-109  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0079  Cobalamin-independent synthase MetE domain protein  63.11 
 
 		 329 aa  387  1e-106  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0833926  n/a   
 
 
-
 
NC_011661  Dtur_1756  Cobalamin-independent synthase MetE domain protein  26.33 
 
 		 325 aa  120  3e-26  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0080  methionine synthase  25.61 
 
 		 350 aa  74.7  0.000000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0497366  n/a   
 
 
-
 
NC_013743  Htur_2396  Methionine synthase vitamin-B12 independent  26.49 
 
 		 358 aa  72.8  0.000000000008  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
CP001800  Ssol_1385  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  22.81 
 
 		 332 aa  72.8  0.000000000009  Sulfolobus solfataricus 98/2  Archaea  normal  0.25974  n/a   
 
 
-
 
NC_009440  Msed_2248  methionine synthase  21.69 
 
 		 331 aa  71.2  0.00000000002  Metallosphaera sedula DSM 5348  Archaea  normal  0.88722  normal  0.0178602 
 
 
-
 
NC_012029  Hlac_2108  methionine synthase  24.56 
 
 		 356 aa  65.1  0.000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.112744  normal  0.0912449 
 
 
-
 
NC_013922  Nmag_1089  Methionine synthase vitamin-B12 independent  26.52 
 
 		 366 aa  63.9  0.000000003  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_2667  methionine synthase  22.99 
 
 		 355 aa  64.3  0.000000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009440  Msed_2249  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  23.94 
 
 		 320 aa  62  0.00000001  Metallosphaera sedula DSM 5348  Archaea  normal  0.349375  normal  0.145883 
 
 
-
 
NC_008148  Rxyl_0842  cobalamin-independent synthase MetE-like protein  24.7 
 
 		 311 aa  61.6  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.368488  n/a   
 
 
-
 
CP001800  Ssol_1384  Cobalamin-independent synthase MetE domain protein  21.14 
 
 		 328 aa  57.4  0.0000003  Sulfolobus solfataricus 98/2  Archaea  normal  0.273814  n/a   
 
 
-
 
NC_011661  Dtur_1757  methionine synthase  21.82 
 
 		 342 aa  55.8  0.000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2779  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  23.6 
 
 		 341 aa  50.4  0.00004  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3434  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.18 
 
 		 777 aa  48.5  0.0001  Burkholderia multivorans ATCC 17616  Bacteria  decreased coverage  0.0080658  normal  0.291084 
 
 
-
 
NC_008543  Bcen2424_5286  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.18 
 
 		 764 aa  48.1  0.0002  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_3081  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.18 
 
 		 764 aa  48.1  0.0002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2550  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  27.81 
 
 		 341 aa  47.4  0.0003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.812544 
 
 
-
 
NC_007948  Bpro_3466  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  28.49 
 
 		 343 aa  47.8  0.0003  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.750884 
 
 
-
 
NC_007778  RPB_3210  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  29.75 
 
 		 340 aa  47.4  0.0003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.370481  normal  1 
 
 
-
 
NC_009485  BBta_2188  methionine synthase (B12-independent)  22.45 
 
 		 344 aa  46.6  0.0006  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2516  methionine synthase, vitamin-B12 independent  24.65 
 
 		 340 aa  46.2  0.0008  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.57162 
 
 
-
 
NC_010515  Bcenmc03_4982  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.5 
 
 		 764 aa  45.4  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2475  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  29.75 
 
 		 340 aa  45.8  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_5175  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.07 
 
 		 764 aa  44.7  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.188369 
 
 
-
 
NC_009767  Rcas_2758  methionine synthase vitamin-B12 independent  27.06 
 
 		 340 aa  44.7  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000302857  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0362  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.15 
 
 		 764 aa  45.1  0.002  Burkholderia sp. 383  Bacteria  normal  0.997242  normal  0.880013 
 
 
-
 
NC_008391  Bamb_4646  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.73 
 
 		 764 aa  43.9  0.004  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.910139 
 
 
-
 
NC_013525  Tter_1188  5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase  22.32 
 
 		 767 aa  43.5  0.005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0841  methionine synthase (B12-independent)  22.85 
 
 		 385 aa  43.1  0.006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0025  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  24.18 
 
 		 797 aa  43.1  0.006  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3153  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase  30.65 
 
 		 342 aa  43.1  0.006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.720863  normal  1 
 
 
-
 
NC_008700  Sama_2627  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase  23.75 
 
 		 756 aa  43.1  0.007  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>