| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2627 |
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| Symbol | |
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| ID | 4604874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3145316 |
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| End bp | 3147586 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782038 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_928499 |
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| Protein GI | 119775759 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA ATAGTCTTGG CTTTCCACGG ATAGGACGTC GCCGTGAGTT GAAGTTCGCC
CTCGAGCAAT ACTGGCGTGG AGAGTTGTCC CGGAATGAGC TGGTGGCGCA GGCCAAGGCA
CTGCGGCAGA CTCACTGGCA GTGGCAGGCT GATGCCGGCG TGGAACGTTT GCCGGTGGGG
GACTTTGCAT ACTACGATCA GGTGCTGACT CTGGCGGCCA CCCTGAATGT CATTCCCGAG
CGCCACCGCG ATGGCGACAA GGTCGACCTG GATACCCTGT TCCGGGTTGC CCGAGGCCGT
GCGCCAAGCG GCAAAGCGGC CGCGGCGGCA GAAATGACCA AGTATTTCAA CACCAACTAT
CACTACATAG TGCCCGAACT TCACCCCAAC CAAACCTTCT CCATCGCCTG GACACAGCTG
TTTGATGAGG TCGAAGAAGT GAAAGCGCTG GGCTATGACC CCAAACCCTG CATTCTGGGC
CCCGTGTCTT TCCTGTATTT GTCGAAGGCC TACGGCAGTG AGTTTGACAA ATTAAGCTTG
CTGCCCCAGC TGCTGGTTAC CTATGCTGAG CTGCTCGCCC GCTTTGCCGC CCAGGGCGTG
AGCTGGGTAC AAATCGAAGA GCCTGTTCTT GCGCTGGATC TGGATGAAAG CTGGCAGGCA
GCCTTTGCCA CCGCATACCA GGCTTTTACC TGTGTGTCGG TTAAACTGCT GCTGACCACT
TACTACGGCT CTGTGGCACA CCACGCCGAC ATTATTCAGA CCCTGCCGGT GGCGGGTTTG
CATCTGGATC TGGTTTCTGC CCCGGAGCAG CTCGAGGTTT TCCTTCCCAG GCTTGGGCAG
CAGCAGGTAC TGAGTCTTGG CCTTATCAAT GGCCGCAATG TCTGGGCTGA AGATCTGGAT
TTGATTGCCG AGCGCATTGC ACCTGTTGCC AGAGAACTGG GCGATCGCCT GTGGCTTGCC
ACCTCCTGCT CGCTGCTGCA CACACCGGTG GACCTCGATG TGGAAACCGC ACTTAAGCCT
GAGCTCAAGC GCCAGCTCGC TTTTGCCAGG CAAAAGCTGC TGGAGCTGAG AAGCCTCAAT
ACCCTGCTAA CCGTGCCCAA TGGCGCAGAC GCCGCTGCCA TTGCCGCCGA GTGCGTGGCC
CGCCGCACTG CGCGTGCTCA GGCCGCCGAT GCTGCAGTTG CCGCCAGACT GGATGCACTG
ACCAAAGCAG ATTTTGAACG TCAAAGCGCG TTTCCAGAGC GTCAGCAACA GCAGCAACAG
CGACTTAAGT TGCCTCTGCT GCCAACCACT ACCATAGGCT CCTTCCCGCA GACGCCGGCA
ATTCGTGGCC TGCGTAACCG CTTTCGAAAA GGTGAAATCA GCGCCCTTGA GTACGACAAC
CAGCTCAGAC AGGTGTGCCG CAATACCATT GACCGCCAAC TGAAACTCGG TATCGATGTG
CTGGTACACG GTGAGGCCGA GCGTAACGAT ATGGTGGAAT ACTTTGGCGA GCAGCTCGAG
GGTGTCGGCT TTACCAAACA TGGCTGGGTG CAGAGTTATG GCAGTCGCTG TGTGAAACCG
CCTTTGATTT ACGGTGATGT GTCGCGTCCC AAACCTATGA CACTGGACTG GGCTGAATAT
GCCCAGAGCC TCACCGATAA GCCGGTGAAA GGCATGTTGA CGGGGCCTGT GACCATTCTG
CACTGGTCTT TTGCCAGGGA AGATATCAGC CGCGACACGC TTTGTAAGCA GATTGCGCTG
GCCATACGGG ATGAAGTCGC TGATCTTGAA AGGGTAGGTA TCGCCATTAT CCAGATTGAC
GAGCCGGCCT TCCGTGAAGG TTTGCCGCTG CGCCGTTGTG ACTGGAAGGC CTATCTCGAC
TGGGCGGTGG ACTCCTTTAA GCTGAGCGCT GCCTGCGTGC GGGATAACAC CCAAATTCAC
ACCCACATGT GCTATAGCGA ATTTAACGAC ACCATAGCTG CTATCGCCGC CATGGATGCC
GATGTTATCA CCATCGAGAC CAGTCGCTCG GCCATGGAGC TGCTGCGAGC CTTTGAAGAC
TTTGAGTATC CTGCTGAAAT TGGCCCGGGT GTGTACGATA TCCACTCGCC CAACACGCCA
GATGTTGGGG CCATGGTGAC GCTGATGGAA AGGGCAGCCA GGCGTATTCC GCTCAGGCAG
CTGTGGGTCA ATCCGGACTG CGGCCTGAAG ACCCGTACCT GGGATGAGGT AGAACCAGCC
CTTCGTAACA TGGTTGACGC CACCCGTGAG CTGCGGCGTC GTCTGGGCTA A
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| Protein sequence | MQLNSLGFPR IGRRRELKFA LEQYWRGELS RNELVAQAKA LRQTHWQWQA DAGVERLPVG
DFAYYDQVLT LAATLNVIPE RHRDGDKVDL DTLFRVARGR APSGKAAAAA EMTKYFNTNY
HYIVPELHPN QTFSIAWTQL FDEVEEVKAL GYDPKPCILG PVSFLYLSKA YGSEFDKLSL
LPQLLVTYAE LLARFAAQGV SWVQIEEPVL ALDLDESWQA AFATAYQAFT CVSVKLLLTT
YYGSVAHHAD IIQTLPVAGL HLDLVSAPEQ LEVFLPRLGQ QQVLSLGLIN GRNVWAEDLD
LIAERIAPVA RELGDRLWLA TSCSLLHTPV DLDVETALKP ELKRQLAFAR QKLLELRSLN
TLLTVPNGAD AAAIAAECVA RRTARAQAAD AAVAARLDAL TKADFERQSA FPERQQQQQQ
RLKLPLLPTT TIGSFPQTPA IRGLRNRFRK GEISALEYDN QLRQVCRNTI DRQLKLGIDV
LVHGEAERND MVEYFGEQLE GVGFTKHGWV QSYGSRCVKP PLIYGDVSRP KPMTLDWAEY
AQSLTDKPVK GMLTGPVTIL HWSFAREDIS RDTLCKQIAL AIRDEVADLE RVGIAIIQID
EPAFREGLPL RRCDWKAYLD WAVDSFKLSA ACVRDNTQIH THMCYSEFND TIAAIAAMDA
DVITIETSRS AMELLRAFED FEYPAEIGPG VYDIHSPNTP DVGAMVTLME RAARRIPLRQ
LWVNPDCGLK TRTWDEVEPA LRNMVDATRE LRRRLG
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