Gene RPB_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3210 
Symbol 
ID3911011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3671453 
End bp3672475 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID637885112 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 
Protein accessionYP_486817 
Protein GI86750321 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.370481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTC CGACCACGAT CGCCGGCTCC TTGCCGAAGC CCGAATGGCT CGCCGAACCC 
GACAAGCTGT GGGCGCCGTG GAAATCCTCG GGCGCGGAAC TGCAGCGCGC CAAGCGCGAC
GCCACGATTC TCGCGCTGAA GCTGCAGGAG GATTCCGGCG TCGACATCGT CACGGAAGGC
GAGCAGGCGC GGCAGCATTT CGTCCACGGC TTTCTCGAAG CGGTCGAAGG CATCGACTTC
GCCCACAAGG TCGAGATGGG CATCCGCAAC GATCGCTACA AAGCGATGGT GCCGCAGGTG
GTGGCGCCGC TGCGCCTGAA GGGCCGCGTC CACGAATTCG AGGCGCGGGT GGCGCGCGCG
CATACAAAGC AGAAGATCAA GTTCACCCTG CCCGGCCCGA TGACGATCAT CGACACCATC
GCCGACCAGT ACTACGGCGA CCGCGTCAAG ATGGCGTTCG CCTTCGCCGA GCTGCTCAAT
CAGGAAGCCA AAGCGTTGCA GGCCGACGGC ATCGACATGA TCCAGTTCGA CGAGCCGGCG
TTCAACGTCT ACATGAGCGA GGCCGCCGAT TGGGGCGTCA AGGCGCTGGA GCGCGCCGCC
GAAGGCCTCA CCTGCGCCAC CGCCGTGCAC ATCTGCTACG GCTACGGCAT CAAGGCCAAC
ACCGACTGGA AAGAAACGCT CGGCGCCGAG TGGCGGCAAT ACGAACAGAT CTTTCCGGCG
ATCGACGCCA GTCCAATTCA GCAAGTCGCG ATCGAATGCC GTAATTCGAA AGTGCCGCTG
GAATTGCTGT CGCTGCTGCC CGGCAAGATC GTCCAGGCCG GTGTCATCGA CGTCGCCAGC
GACGCGATCG AAACCGCCGA CGACGTTTGC GCCACGATCG AAGCGGTGAT GCAACACGTG
CCGAAGAGCA ACATCGTCGC CACGACCAAT TGCGGCATGG CCCCGATGCG CCGCGACATC
GCCGAGGCGA AACTCGCCGC GCTCGGCGCC GGCGCGGCGC TGGCGCGGGA GACGTTCGGC
TGA
 
Protein sequence
MLFPTTIAGS LPKPEWLAEP DKLWAPWKSS GAELQRAKRD ATILALKLQE DSGVDIVTEG 
EQARQHFVHG FLEAVEGIDF AHKVEMGIRN DRYKAMVPQV VAPLRLKGRV HEFEARVARA
HTKQKIKFTL PGPMTIIDTI ADQYYGDRVK MAFAFAELLN QEAKALQADG IDMIQFDEPA
FNVYMSEAAD WGVKALERAA EGLTCATAVH ICYGYGIKAN TDWKETLGAE WRQYEQIFPA
IDASPIQQVA IECRNSKVPL ELLSLLPGKI VQAGVIDVAS DAIETADDVC ATIEAVMQHV
PKSNIVATTN CGMAPMRRDI AEAKLAALGA GAALARETFG