| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2107 |
|---|
| Symbol | |
|---|
| ID | 7400627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2097408 |
|---|
| End bp | 2098409 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643709177 |
|---|
| Product | Cobalamin-independent synthase MetE domain protein |
|---|
| Protein accession | YP_002566754 |
|---|
| Protein GI | 222480517 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.133546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0920246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC GAGTCGCAGC CACACCGGGG CTGTACCCGC TTCCGGACTG GGCGAAGGAG
ACGCTCTCCG ACCTGAAGGG TCACCAGAAG GGTGACCTGC TGAGCGGCGA CGAGAGCGAG
GCGATCGTCA AGGAGTACGA CGAGGTGCGC ACCGAGTACG TCAACGACCA GCTCGACGCC
GGCCTCGACC GCGTGGTCGA GGGACAGGGG CGTTGGGACG ACATGATCGC GCATCCGCTG
ACGGTGCACG ACAGCGTCGA GACCGGCGGG ATCGTCCGGT ACTACGACAA CAACAACTTC
TACCGCGACC CACGGGTCGT CGACGACCTC GACTTCTCGG GCGACGTGGC GCGCGAGCTG
GAGCGGGCCA CCGACCTGAT CGACGGTGAG GCACCTCTCG CGGCGACGCT TCCCGGCCCG
TATTCGCTCG CCGACCTCGC GACCGACGAG CACTACGGCG ACGAGGCCGC GTTCCAGGCC
GCCATCGCCG AGTTCCTCGC CGGCGAGGTC GAGGCGTTTC CCGCCCACGA GACGCTGTTC
CTCCTCGAAC CGTCGCTGGT GACGAACCCG CCCGCCGAGG GCGAGGAGTC GACCGCGACC
GACGCGATCG CAACGGTCGC CGACGCGACC GACGCCGACG TGGTCGTCCA GACCTCCTAC
GGCGCGCTCG ACGAGAAGCT GTACGCCCAC CTCGTCGACG AGGCGAGCGC GGACGCGCTC
GGGCTCGATC TGGTCGCCGG CGACCGCGAC GACACGGTGT ACAACGTTCA GGAGTTCGGC
GCCACCGACT CACTCGCGCT CGGGCTCGTC GACGGGCAGA ACACGCTCGT TGAGGAGCCG
GAGACGATCG CGGAGCGCGT CGAGTGGTTC GAGTCGCAGA TCCCCGCTGA AGGGTTCGAC
CGGACCTACC TGACGCCGAA CACCGAGCTG TTCTACCTGC CGGCCAACAA GTACCGCGCG
AAGCTGAACA CGCTGGCCGC CGCCGCGGAG GTGCTCGAAT AA
|
|---|
| Protein sequence | MTERVAATPG LYPLPDWAKE TLSDLKGHQK GDLLSGDESE AIVKEYDEVR TEYVNDQLDA
GLDRVVEGQG RWDDMIAHPL TVHDSVETGG IVRYYDNNNF YRDPRVVDDL DFSGDVAREL
ERATDLIDGE APLAATLPGP YSLADLATDE HYGDEAAFQA AIAEFLAGEV EAFPAHETLF
LLEPSLVTNP PAEGEESTAT DAIATVADAT DADVVVQTSY GALDEKLYAH LVDEASADAL
GLDLVAGDRD DTVYNVQEFG ATDSLALGLV DGQNTLVEEP ETIAERVEWF ESQIPAEGFD
RTYLTPNTEL FYLPANKYRA KLNTLAAAAE VLE
|
|---|
| |