14 homologs were found in PanDaTox collection
for query gene HMPREF0424_1306 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_1306  extracellular solute-binding protein  100 
 
 		 471 aa  969    Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
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NC_013721  HMPREF0424_1305  extracellular solute-binding protein  59.15 
 
 		 447 aa  551  1e-155  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
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NC_010816  BLD_1505  MalE-type ABC sugar transport system periplasmic component  54.04 
 
 		 442 aa  486  1e-136  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0604  extracellular solute-binding protein family 1  43.58 
 
 		 436 aa  358  8e-98  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.293813 
 
 
-
 
NC_010001  Cphy_1074  extracellular solute-binding protein  42.47 
 
 		 440 aa  355  1e-96  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00779107  n/a   
 
 
-
 
NC_010320  Teth514_1115  extracellular solute-binding protein  24.77 
 
 		 439 aa  86.7  9e-16  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.0000327347  n/a   
 
 
-
 
NC_008528  OEOE_0021  ABC-type sugar transport system, periplasmic component  24.25 
 
 		 428 aa  70.5  0.00000000006  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
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NC_011661  Dtur_0548  extracellular solute-binding protein family 1  24.44 
 
 		 426 aa  70.1  0.00000000008  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0032157  n/a   
 
 
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NC_011898  Ccel_3350  extracellular solute-binding protein family 1  24.45 
 
 		 461 aa  53.9  0.000007  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
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NC_008541  Arth_3387  extracellular solute-binding protein  25.89 
 
 		 447 aa  50.8  0.00006  Arthrobacter sp. FB24  Bacteria  normal  0.278202  n/a   
 
 
-
 
NC_011886  Achl_1750  extracellular solute-binding protein family 1  25.59 
 
 		 448 aa  48.1  0.0003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000348272 
 
 
-
 
NC_004347  SO_2693  prophage MuSo2, tail sheath protein, putative  25.58 
 
 		 493 aa  44.3  0.005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  25.61 
 
 		 435 aa  43.9  0.006  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.23125 
 
 
-
 
NC_008541  Arth_0744  extracellular solute-binding protein  25.06 
 
 		 432 aa  43.5  0.009  Arthrobacter sp. FB24  Bacteria  normal  0.0587531  n/a   
 
 
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