Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_0548 |
Symbol | |
ID | 7083210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | + |
Start bp | 545391 |
End bp | 546671 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643457626 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002352452 |
Protein GI | 217966946 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0032157 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTGA GGAAGGTTTT AAGTTTAATT TTAGTTTTGA GTTTTATTAT CTTTTTGAAT TTGGGAGGTC TTAATGCAGC TGAAAAGGTA AAGATTACAT TGTTAAGTAC AAAAGGGGAA ATTAATGCTG CTTTGGAAGG AGTAGCAAAG GATTTTTCTA AGGATTATCC TAACATAAGT TTAGAGATTA TTCCTGTTGG GGTTGGCCAG TCTCCTTTTG AAAAACTTTC TACAATGTAT GCATCAGGTA ATGCACCTAC TCTTGCAATG ATAGATGTAA ATGATGTGCC TAAGTTTAAA GAAAATTTCT TAGATCTGTC TAATGAAGAG TGGGTAAAAG ATGCAGTAAA AGGAGCCTTG AATGATATAA CCTTTGACAA GAAAGTGATG GCTTTTCCTT TTACTATTGA AGGGTATGGC TTAATATATA ATCAACAGGC TATTGAAAAA GTCATAGGTA AATTTGATCC TAAAACTATT GATACAAGAA ACAAATTAGA AGCTTTATTT AAGAAATTAG AAGAGAAGGG TTTAACTCCT ATTGTGGTAT CACCTTTAGA CTGGTCTTTA GGGGCTCATT TTTTAACTAT AGGTTATGTT ACCCAATCTT CTGATCCTAA AAAGATTGAT AAATTTATTG AAGATCTGAA AGCAGGGAAA ATAGATTTGA GTAAAAACAG AAAGATGAAT GGCTTATTAG ATACTTTGGA TATGTGGAAA AAATACAACT ATCTAAAGAG GTCACCTCTT GCAGGAACCT ATGAACAAGG AGCTCAGCTT TTAGCAACTG GAAAGGTTGC ATTTTGGTTT ATGGGAAATT GGGCATGGCC GTTAATTAAA GAGGTTAATC CTAATAATGT ACAATATGGT TTCCTACCTG TTTTTGTAAG TAATATTCCT AATGACTATG GTAATAGAGA AATTCCTGTA GGAGTAACTA AAGTGATAGG AATAGATATG AAACAGAATA GCAGAGAGCA ACAAGAAGCA GCTAGGACAT TTTTAAACTG GCTTGTTTAT AATAAAAACG GACAGAATGC TTGGGTTAAC AAACTTAGTG TTATAACTCC ATTTAAAAAT GTAAAATTGA CTCCTAACGA TCCTCTTGCG AAATCAATAT TTGAGTATAT GAATCAAGGA AGAACTTTAA GATTTTTGGT CACATTGCCT CCAGATCATT GGCCTACTGT TGGTGCTTCT ATGCAAAAAT ACTTAGCTAA TGTTATTAGT AGAGAACAGC TTTTCAAAGA AATAACTGAT TATTGGAGAA AAGTTAAGTA A
|
Protein sequence | MKLRKVLSLI LVLSFIIFLN LGGLNAAEKV KITLLSTKGE INAALEGVAK DFSKDYPNIS LEIIPVGVGQ SPFEKLSTMY ASGNAPTLAM IDVNDVPKFK ENFLDLSNEE WVKDAVKGAL NDITFDKKVM AFPFTIEGYG LIYNQQAIEK VIGKFDPKTI DTRNKLEALF KKLEEKGLTP IVVSPLDWSL GAHFLTIGYV TQSSDPKKID KFIEDLKAGK IDLSKNRKMN GLLDTLDMWK KYNYLKRSPL AGTYEQGAQL LATGKVAFWF MGNWAWPLIK EVNPNNVQYG FLPVFVSNIP NDYGNREIPV GVTKVIGIDM KQNSREQQEA ARTFLNWLVY NKNGQNAWVN KLSVITPFKN VKLTPNDPLA KSIFEYMNQG RTLRFLVTLP PDHWPTVGAS MQKYLANVIS REQLFKEITD YWRKVK
|
| |