Gene Dtur_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0548 
Symbol 
ID7083210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp545391 
End bp546671 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content33% 
IMG OID643457626 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002352452 
Protein GI217966946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0032157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGA GGAAGGTTTT AAGTTTAATT TTAGTTTTGA GTTTTATTAT CTTTTTGAAT 
TTGGGAGGTC TTAATGCAGC TGAAAAGGTA AAGATTACAT TGTTAAGTAC AAAAGGGGAA
ATTAATGCTG CTTTGGAAGG AGTAGCAAAG GATTTTTCTA AGGATTATCC TAACATAAGT
TTAGAGATTA TTCCTGTTGG GGTTGGCCAG TCTCCTTTTG AAAAACTTTC TACAATGTAT
GCATCAGGTA ATGCACCTAC TCTTGCAATG ATAGATGTAA ATGATGTGCC TAAGTTTAAA
GAAAATTTCT TAGATCTGTC TAATGAAGAG TGGGTAAAAG ATGCAGTAAA AGGAGCCTTG
AATGATATAA CCTTTGACAA GAAAGTGATG GCTTTTCCTT TTACTATTGA AGGGTATGGC
TTAATATATA ATCAACAGGC TATTGAAAAA GTCATAGGTA AATTTGATCC TAAAACTATT
GATACAAGAA ACAAATTAGA AGCTTTATTT AAGAAATTAG AAGAGAAGGG TTTAACTCCT
ATTGTGGTAT CACCTTTAGA CTGGTCTTTA GGGGCTCATT TTTTAACTAT AGGTTATGTT
ACCCAATCTT CTGATCCTAA AAAGATTGAT AAATTTATTG AAGATCTGAA AGCAGGGAAA
ATAGATTTGA GTAAAAACAG AAAGATGAAT GGCTTATTAG ATACTTTGGA TATGTGGAAA
AAATACAACT ATCTAAAGAG GTCACCTCTT GCAGGAACCT ATGAACAAGG AGCTCAGCTT
TTAGCAACTG GAAAGGTTGC ATTTTGGTTT ATGGGAAATT GGGCATGGCC GTTAATTAAA
GAGGTTAATC CTAATAATGT ACAATATGGT TTCCTACCTG TTTTTGTAAG TAATATTCCT
AATGACTATG GTAATAGAGA AATTCCTGTA GGAGTAACTA AAGTGATAGG AATAGATATG
AAACAGAATA GCAGAGAGCA ACAAGAAGCA GCTAGGACAT TTTTAAACTG GCTTGTTTAT
AATAAAAACG GACAGAATGC TTGGGTTAAC AAACTTAGTG TTATAACTCC ATTTAAAAAT
GTAAAATTGA CTCCTAACGA TCCTCTTGCG AAATCAATAT TTGAGTATAT GAATCAAGGA
AGAACTTTAA GATTTTTGGT CACATTGCCT CCAGATCATT GGCCTACTGT TGGTGCTTCT
ATGCAAAAAT ACTTAGCTAA TGTTATTAGT AGAGAACAGC TTTTCAAAGA AATAACTGAT
TATTGGAGAA AAGTTAAGTA A
 
Protein sequence
MKLRKVLSLI LVLSFIIFLN LGGLNAAEKV KITLLSTKGE INAALEGVAK DFSKDYPNIS 
LEIIPVGVGQ SPFEKLSTMY ASGNAPTLAM IDVNDVPKFK ENFLDLSNEE WVKDAVKGAL
NDITFDKKVM AFPFTIEGYG LIYNQQAIEK VIGKFDPKTI DTRNKLEALF KKLEEKGLTP
IVVSPLDWSL GAHFLTIGYV TQSSDPKKID KFIEDLKAGK IDLSKNRKMN GLLDTLDMWK
KYNYLKRSPL AGTYEQGAQL LATGKVAFWF MGNWAWPLIK EVNPNNVQYG FLPVFVSNIP
NDYGNREIPV GVTKVIGIDM KQNSREQQEA ARTFLNWLVY NKNGQNAWVN KLSVITPFKN
VKLTPNDPLA KSIFEYMNQG RTLRFLVTLP PDHWPTVGAS MQKYLANVIS REQLFKEITD
YWRKVK