11 homologs were found in PanDaTox collection
for query gene Gbem_0262 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0262  hypothetical protein  100 
 
 
152 aa  294  3e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0247  hypothetical protein  86.84 
 
 
152 aa  143  9e-34  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000151138 
 
 
-
 
NC_009483  Gura_1638  hypothetical protein  36.57 
 
 
129 aa  75.5  0.0000000000003  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000846806  n/a   
 
 
-
 
NC_002939  GSU1995  hypothetical protein  41.82 
 
 
242 aa  48.9  0.00002  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.000089433  n/a   
 
 
-
 
NC_011146  Gbem_3220  hypothetical protein  40.98 
 
 
189 aa  48.1  0.00004  Geobacter bemidjiensis Bem  Bacteria  normal  0.0165343  n/a   
 
 
-
 
NC_007517  Gmet_1226  hypothetical protein  30.21 
 
 
180 aa  47.4  0.00008  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00745865 
 
 
-
 
NC_009483  Gura_2821  hypothetical protein  40 
 
 
178 aa  47  0.0001  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000000141194  n/a   
 
 
-
 
NC_012918  GM21_1043  hypothetical protein  35.21 
 
 
202 aa  44.3  0.0006  Geobacter sp. M21  Bacteria  n/a    normal  0.0297225 
 
 
-
 
NC_007517  Gmet_2047  hypothetical protein  42 
 
 
177 aa  42.7  0.002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000144748  hitchhiker  0.000000493241 
 
 
-
 
NC_010814  Glov_3562  hypothetical protein  47.22 
 
 
144 aa  41.6  0.004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2039  hypothetical protein  28.74 
 
 
176 aa  40.4  0.009  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000119877  n/a   
 
 
-
 
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