Gene Gmet_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1226 
Symbol 
ID3738403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1382188 
End bp1382730 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID637778507 
Producthypothetical protein 
Protein accessionYP_384188 
Protein GI78222441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00745865 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCGCT TTGCATGCAC CGTGATGATC CTGGCTCTGG CCGTGGCGGC CCAAGCCGAC 
ATATACAAGT GGGTGGACCA GCGAGGGACG GTCAACTACA CTGAAGACCT TGGCAAGGTT
CCCAAAAAAT ACCGGAAGAA AGTAACGGTT ATTCCCGAAG GTGGGGCGCC TGCGGCCGAG
GTGACGGAAA CTGTCGTCGA GCGGGGAGGC AAAGAGAAGA AGCCGGAAAC CGGGCAGAAG
GAAGTTGAAA ACGCACTGGC GCCGAAACAG GAAAAAAAGA AGATGGTCTA CGGCGGCAAG
GATGAGGATG CCTGGAAAAC CGAGTTCAGG ACGCTGAGGA GTGAGATCAA AGCCAACGAG
GCAGAACTCG CCGCGCGTCG TGGCCGGTTG GCCAATCCCG GCACCATGAA CCGTGGCGAT
TTTCTGGGGG TCCAGAGGGA AGCAAAGAGG ATAGAGGAGA CGCTGACCGG CCTGAATACC
AAGCTTAACA CCCTTGAAGA GAGTGCCCAA CGGGCCGGCG TGCCGCTGGA ACTGCGGAAG
TAG
 
Protein sequence
MTRFACTVMI LALAVAAQAD IYKWVDQRGT VNYTEDLGKV PKKYRKKVTV IPEGGAPAAE 
VTETVVERGG KEKKPETGQK EVENALAPKQ EKKKMVYGGK DEDAWKTEFR TLRSEIKANE
AELAARRGRL ANPGTMNRGD FLGVQREAKR IEETLTGLNT KLNTLEESAQ RAGVPLELRK