7 homologs were found in PanDaTox collection
for query gene Dshi_2290 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_2290  hypothetical protein  100 
 
 		 432 aa  862    Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_0267  hypothetical protein  41.19 
 
 		 409 aa  271  2e-71  Colwellia psychrerythraea 34H  Bacteria  normal  0.254673  n/a   
 
 
-
 
NC_009901  Spea_3012  carbohydrate-selective porin OprB  37.53 
 
 		 414 aa  271  2e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  0.339715  n/a   
 
 
-
 
NC_010682  Rpic_1590  Carbohydrate-selective porin OprB  26.97 
 
 		 476 aa  49.3  0.0001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3166  Carbohydrate-selective porin OprB  25.83 
 
 		 482 aa  49.7  0.0001  Ralstonia pickettii 12J  Bacteria  normal  0.390986  hitchhiker  0.000000000149961 
 
 
-
 
NC_010682  Rpic_1665  Carbohydrate-selective porin OprB  26.76 
 
 		 482 aa  45.4  0.002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_2951  Carbohydrate-selective porin OprB  26.76 
 
 		 482 aa  45.4  0.002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
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