| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3166 |
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| Symbol | |
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| ID | 6288994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3317675 |
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| End bp | 3319123 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626741 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001900720 |
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| Protein GI | 187930233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.390986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000149961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGTTTG CTTCCATCGT CAAATCCGTC CGGAAGGCAG TACGCGCACT TATCTCGCTG
GTGCGCGCCG CTGCTGCGGG CTGCCGTCCG CCCATTTTTG CTGCCATGGT GCTGCTATGG
GTTTCTGCCC AGGCTGCCGA TGCTGCAGAG GCGCTTGCAT CGGTGCCGGC TGCCGCGACG
CCGCTCATTG CCGGAGGCGA GTTCGGCGAT CGCTTTGGTT TTCACGGTCA ATCCACCTGG
GTCTGGCAGG CCAAACCTGC GTTCAAGTCG CCGTATAGCG GTGACAACAG CCTGACGGCG
GACCGGGCGA CCAGTTACTC CTTCAGCACC ACGCTCGATC TCGGCATGCG GTTGTGGAGG
GGCGCCGAGT TCCACTTCAA CCCAGAAGTC GTGATGGGCA AGGCATTCTC CGATCTGCAC
GGGCTGGGCG GCCCAACCAA CGGGGAACTG GCCAAGGTCA CGGGCACCGA CCCGACGCTC
TATCGCGCTC GCGTGTTCCT GCGCCAGACC TGGGGTCTGG GCGGCGACAC CGAAAAGGTC
GATGCCGACT TCAACCAGTT CGCCGACGTT GTGGACAAGC GTCGCGTGGT ACTCACCGTG
GGCAATTTGC CCGTGCTCGA CGTGTTCGAT GCGGTGGAGT ACGCGCACGA TCCGCGCACG
CAGTTCCTAA ACTGGTCGTT CATGACGCAT CCGTCGTTCG ACTATGCTGC GGATGCGCGC
GGCTACAGCT GGGGGATTGC GCTGGAGTAC ACCGATAGCG AGTTCGGCTG GGCCGTGCGC
GCGGGCCGCT TCCTGCAGCC GGTGGAGTCC AACGGCTTGC CGCTCGACAC CCGTTTTCTC
AAGCACTACG GCGACATGCT CGAACTGGAG AAGAGCTTCA CGCTGTTCGG CCAGGAGGGC
AAAGTGCGCC TACTCGGATG GCGAAACTTC GCACGCATGG GCCGCTTTGA CGATGCCATT
GCGCTCGGTC AAGCCACTGC GGGCCAGCCC GATTTGAGTC TGGTTCGGCG TGAGCACGCC
AAGGTCGGCG TGGGTTTGTC CTTCGAGCAA AAGGTGGGTG AAAACTTGGG CCTCTTCACC
CGATTGAACT GGTCGGATGA TAAGACCGAG ACCTATGCTT TTACGGAAGC GGGGCGCAAC
GTGTCGTTTG GCGGCTTGCT CAAGGGCGCG TCGTGGGGGC GTCCGGACGA TGTGCTGGGG
GCGGCCTTTT CGCTCAACAT GCTGGGCCCG GACCATCGCG CCTATTTGGC CGCAGGCGGC
AACGGCGCGT TCCTGGGCGA TAGCGCCTTG AACTACGGCC ACGAACGCAT ACTCGAAGTG
TTTTACAGCT TTCAACCGGT CAAGGGCATC ATGCTCAGCC CCGATTTTCA GTTAATCCAG
AACCCCGGCT ACAACCGGGA CCGCGGGCCT GCCAAGTTCT TCGGCCTGCG CGTCCACGCC
GAGTTCTAA
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| Protein sequence | MLFASIVKSV RKAVRALISL VRAAAAGCRP PIFAAMVLLW VSAQAADAAE ALASVPAAAT
PLIAGGEFGD RFGFHGQSTW VWQAKPAFKS PYSGDNSLTA DRATSYSFST TLDLGMRLWR
GAEFHFNPEV VMGKAFSDLH GLGGPTNGEL AKVTGTDPTL YRARVFLRQT WGLGGDTEKV
DADFNQFADV VDKRRVVLTV GNLPVLDVFD AVEYAHDPRT QFLNWSFMTH PSFDYAADAR
GYSWGIALEY TDSEFGWAVR AGRFLQPVES NGLPLDTRFL KHYGDMLELE KSFTLFGQEG
KVRLLGWRNF ARMGRFDDAI ALGQATAGQP DLSLVRREHA KVGVGLSFEQ KVGENLGLFT
RLNWSDDKTE TYAFTEAGRN VSFGGLLKGA SWGRPDDVLG AAFSLNMLGP DHRAYLAAGG
NGAFLGDSAL NYGHERILEV FYSFQPVKGI MLSPDFQLIQ NPGYNRDRGP AKFFGLRVHA
EF
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