| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2290 |
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| Symbol | |
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| ID | 5713944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2419657 |
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| End bp | 2420955 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268213 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533627 |
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| Protein GI | 159044833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCG CTTTTCCACC CCCCGACACA TGCCCCGCGA CGCCGCCATG CCGGTCTCTG
CGGCTCCCCT CGCTTGCCGC ATCCACTGTG TTGTTAGCAT TCGGGCCTTC GAGCCTCGCG
CAGGCCGCGA ACGTGGCAGA AACCTTGTCG GGGCCTTCCG CAACTCCGAG CACGCTGAGC
TATGACGCGC AGGACAAGGA CAGCCTGCTC GCCGTCGACA TCCAGGAGGG GTGGACCCAG
TGGAAATCCG ACCTCGAAGC CCGCACCGGG CTGACCCTCG GGTTCGATTA CAATGCCCTG
GGTTTCCGGG CCAGTTCCAG CCCTGGCGAC CGGACCGCCG GCAGCGGCGT GTTTCGCGCT
TTCGGGAAAT GGGCCCTGGT TGGCAGGGAC GGCCCCAACA CCGGTAACCT CGTGTTCAAG
CTGGAACAGC GCCACGCCTA TGGCGATCTC GCAGTGACGG ATTTCGGCAC CGAGCTTGGC
TATGTCGGGC TGGTCAATTC GGTCTTCAAC GACCAGGGAT GGCGGGCCAC GAACCTCTAC
TGGCAGCAGA ATCTCGCGGA TGGACAGGCC GTGGTATCAG TCGGATGGCT CGACGTGACC
GACTATGTCG ATGTCTTTGC CTTGGCGAGC CCTTGGACCG GGTTTTCCAA CTTGGCGTTC
CAGACCGGCT CCGGCACCAT CGGCGGCCTG CCTGATGGTG CCTTGGGTGC GGTCGCGGCC
GGATTCCTGA CCGACAGGGT CTATGCGGCG GTTGGGATCG TGGACGCCAA CGGGGACGCC
ACGGACCTGC TGGGCGGCTT CGATACCCTG TTCGACGAGG GTGAGACCTT CAAATCTCTG
GAACTGGGTT GGACTTCCGG ACCGAAGGCG CTCTTCATCG ACAACGCCCA TGTGACCCTA
TGGCAAATCG ACGAGCGCAC CAAGGCCGGC AGTGACGATG GCTACGGCAT CGCCTTCTCT
TATACTCGCG GTATCGAAAA CACATGGCTG CCATTTGTGC GCGGCGGCTG GGCCGATGCG
GGCGGCAGCC TCTACGAGGC GGCACTCAGT GTCGGCGTCG GCTACACCCA AAACCCCGGT
CGCCAACTGA CCGGCCTTGG CGTGAACTGG AGCCGCCCGA ACGACGACAC GTTCGGAGTC
GATCTGGACG ATCAATGGAC GGTGGAGGCT TTCAGCCGCT GGCAACTGAC CGAGGGGATT
GAAATCACGC CGAGCGTGCA GATCATCCAG AACCCCGCCC TGAACCCCGA CAAGGACACC
ATCGCCCTGT TCGGTCTGCG GCTGCGCGCC GCGTTCTGA
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| Protein sequence | MPTAFPPPDT CPATPPCRSL RLPSLAASTV LLAFGPSSLA QAANVAETLS GPSATPSTLS
YDAQDKDSLL AVDIQEGWTQ WKSDLEARTG LTLGFDYNAL GFRASSSPGD RTAGSGVFRA
FGKWALVGRD GPNTGNLVFK LEQRHAYGDL AVTDFGTELG YVGLVNSVFN DQGWRATNLY
WQQNLADGQA VVSVGWLDVT DYVDVFALAS PWTGFSNLAF QTGSGTIGGL PDGALGAVAA
GFLTDRVYAA VGIVDANGDA TDLLGGFDTL FDEGETFKSL ELGWTSGPKA LFIDNAHVTL
WQIDERTKAG SDDGYGIAFS YTRGIENTWL PFVRGGWADA GGSLYEAALS VGVGYTQNPG
RQLTGLGVNW SRPNDDTFGV DLDDQWTVEA FSRWQLTEGI EITPSVQIIQ NPALNPDKDT
IALFGLRLRA AF
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