| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0267 |
|---|
| Symbol | |
|---|
| ID | 3518834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 270913 |
|---|
| End bp | 272142 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637282733 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_267034 |
|---|
| Protein GI | 71278539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.254673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACTA ATAAAACTCT TCTTACTCTT GTCATTACTG GCTTATTAGC CACTGCATCA
ACTTACGCTA CAGAAGATAA TTCTACACAA GACCATTTAG TAAAAGGTCA GAGCGCTAAC
TTTGGTAGCC CAGATGCCGT TGATAACCAA ATAGCTGAAG ACAATAAAAG ATCTAAACCT
GACTTCAAAA CTCAGCTAGA GCACAACAAT ATCAACATGG GAGTAGATTA TTCTACCGTG
TTTCTTGGGG CGAATAATGT ATTAACTGGC TCAGACGATA ACGCTGGCAG TAGCATGATT
CGTTTTTATG GTAGCTGGAA CCCTATTGGC GTTGGCACAA AAGAAGTGGG CGGTTTAGTT
TGGAAGGTTG AACACCGCCA TTCATATACA GATACCTCAG TGAAAGACTT TGAATTTGGC
ACCGGTGGGC TTGGGCTTGT TACTCCCCCT TTTAGTGACC AAGGTTTTCG AGTTACTAAC
CTGTATTACA AACAAAAATA TATGAACGGA AGAGCATCTT TCGTCGCGGG GTTTTTAGAT
ATAACGGACT TTGTCGACGT GTTTGCCATG GCCAGCCCAT GGACAGGCTT TATGAACTTT
GCCTTTAGTA CTGGCACCAC CACAATGGCC TTGCCTGGTG ATGCTGCGTT AGGTGCTGCA
GGCGGAATAA TGTTGTCTGA TGAGTATTAT ATCGTGGCTA GTTTGGTTGA TATGAATTCA
GATCCAACAA ATATTATCGA CGGATTAGAA ACCTTTTTTA AAGAGAATAA ATACTTCAAA
AGTATTGAGC TAGGTTGGAC CAAATCTCAA GGCGAGATAT ATGTCGATAA CATCCACGCT
ACGCTTTGGC ATGCCGACGA AAGTGTGGAG CAAGGGTCTA ACAGAGGGTA TGGCATCAAT
TTTTCTGCTT CACGTTTAAT TGATGGTCAG TGGTTACCCT TTGTTCGCGC TGGGTATTCT
CAAGATGCTG GCACCTTAAT GGAAAAATCA ATCAGTGCGG GTTTTGGTTA TTATGGTTTG
GGTGGTGAAG AGAATAATCT CGGCGCTGCC ATTAACTGGG GGCAAGTTAA AGGTAATGAC
GACCAATATA CCACCGAGGT TTTCTACATT ATGAAACCAT TAGATTATCT AGAGGTAACA
GCCGATTTAC AATATATCGC TAATCCTGCA CTAAATACCC TAGACAACAG CACACTTATC
TATGGTTTAA GGCTTCGTTT AGCAATTTAG
|
|---|
| Protein sequence | MLTNKTLLTL VITGLLATAS TYATEDNSTQ DHLVKGQSAN FGSPDAVDNQ IAEDNKRSKP
DFKTQLEHNN INMGVDYSTV FLGANNVLTG SDDNAGSSMI RFYGSWNPIG VGTKEVGGLV
WKVEHRHSYT DTSVKDFEFG TGGLGLVTPP FSDQGFRVTN LYYKQKYMNG RASFVAGFLD
ITDFVDVFAM ASPWTGFMNF AFSTGTTTMA LPGDAALGAA GGIMLSDEYY IVASLVDMNS
DPTNIIDGLE TFFKENKYFK SIELGWTKSQ GEIYVDNIHA TLWHADESVE QGSNRGYGIN
FSASRLIDGQ WLPFVRAGYS QDAGTLMEKS ISAGFGYYGL GGEENNLGAA INWGQVKGND
DQYTTEVFYI MKPLDYLEVT ADLQYIANPA LNTLDNSTLI YGLRLRLAI
|
|---|
| |