11 homologs were found in PanDaTox collection
for query gene DhcVS_1131 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_1131  DNA-binding protein, excisionase family  100 
 
 		 70 aa  146  8e-35  Dehalococcoides sp. VS  Bacteria  normal  0.0470185  n/a   
 
 
-
 
NC_009455  DehaBAV1_1161  MerR family transcriptional regulator  98.57 
 
 		 74 aa  144  3e-34  Dehalococcoides sp. BAV1  Bacteria  normal  0.137499  n/a   
 
 
-
 
NC_002936  DET1349  excisionase family DNA-binding protein  95.71 
 
 		 72 aa  141  3e-33  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000764481  n/a   
 
 
-
 
NC_013441  Gbro_1042  DNA binding domain protein, excisionase family  48 
 
 		 82 aa  46.2  0.0001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03493  response regulator  40 
 
 		 186 aa  43.9  0.0008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009717  Xaut_4864  DNA binding domain-containing protein  37.93 
 
 		 274 aa  42.7  0.001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.68065  normal  0.158916 
 
 
-
 
NC_009380  Strop_4091  DNA binding domain-containing protein  41.51 
 
 		 90 aa  40.8  0.006  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.446784 
 
 
-
 
NC_013174  Jden_2349  DNA binding domain protein, excisionase family  41.51 
 
 		 79 aa  40.8  0.006  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1938  excisionase family DNA-binding response regulator  40.38 
 
 		 190 aa  40.4  0.008  Colwellia psychrerythraea 34H  Bacteria  normal  0.440271  n/a   
 
 
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NC_009953  Sare_4511  DNA binding domain-containing protein  41.51 
 
 		 88 aa  40.4  0.008  Salinispora arenicola CNS-205  Bacteria  normal  0.812065  hitchhiker  0.00570166 
 
 
-
 
NC_013162  Coch_0851  DNA binding domain protein, excisionase family  40.82 
 
 		 90 aa  40.4  0.009  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.173739  n/a   
 
 
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