Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1131 |
Symbol | soxR |
ID | 8658060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1043184 |
End bp | 1043396 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | DNA-binding protein, excisionase family |
Protein accession | YP_003330573 |
Protein GI | 270308515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0470185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATC ATGAAGATAA TACAGTCTCG CCCATGCTGA CTACCAGCGA AGTAGCCCAC ATGCTGAATG TGCATATAAA CACCGTACGT CGCTGGAGTA ATCAGATGGT GCTTAAATCC TATCGGATTG GGGCCAGAGG TGACCGCCGC TTCCGCAAGG AAGATGTGGA ACAGTTTTTG GAACGGGAAG GCAAAACCAA GCTCCTGAAA TAA
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Protein sequence | MANHEDNTVS PMLTTSEVAH MLNVHINTVR RWSNQMVLKS YRIGARGDRR FRKEDVEQFL EREGKTKLLK
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