| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1938 |
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| Symbol | |
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| ID | 3518737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1998035 |
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| End bp | 1998607 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637284400 |
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| Product | excisionase family DNA-binding response regulator |
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| Protein accession | YP_268668 |
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| Protein GI | 71278637 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.440271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGA AAAAATCAGT AAAAAGCTAC TTAACACCTA AAGAAGTCGC TGAATTACTT
ATGGTTTCTA CTGCCGCGGT ACGTTTGTGG GCAGAAAAAG GGAACTTAAA AGCAAGAGTC
ACTGCTGGCG GGCATCGTCG CTTCAAACTT GATGATATAA AAGAATTTGC GGCTAAAAGA
AACATAGAAC TTAATGTAAA AATGAGTGAA AACCCTAAAG TGTTGATTGT CGATGATGAT
ATTCATTTTG CTGAATTTCT AAAGGCGCTT CTCAAAATAG AGATTGAAAA TGTTGAAGTC
GAAATTAGTT TAGATGGTTT CGATGCAGCG AACAAACTTC ACGATTTTAC TCCGAATATA
CTGTTGTTGG ATCTTAAAAT GCATGGTCTC GATGGTTTTC AAGTTTGCCA AGCGGTAAAG
GAAAATCCTC TTCAAAATCA TATTAGGGTG ATTACCATTT CTGGAAATAC TAGTGAAAGT
GATGCTGAAA AGCTTAAAAA TATTGGTGCA GAAACTTGTT TAAATAAACC GATAGATATT
CCTGTTTTAC TAAAACAATT GGCTTTAAAT TAA
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| Protein sequence | MSSKKSVKSY LTPKEVAELL MVSTAAVRLW AEKGNLKARV TAGGHRRFKL DDIKEFAAKR
NIELNVKMSE NPKVLIVDDD IHFAEFLKAL LKIEIENVEV EISLDGFDAA NKLHDFTPNI
LLLDLKMHGL DGFQVCQAVK ENPLQNHIRV ITISGNTSES DAEKLKNIGA ETCLNKPIDI
PVLLKQLALN
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