11 homologs were found in PanDaTox collection
for query gene DET1349 on replicon NC_002936
Organism: Dehalococcoides ethenogenes 195



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET1349  excisionase family DNA-binding protein  100 
 
 
72 aa  150  7e-36  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000764481  n/a   
 
 
-
 
NC_009455  DehaBAV1_1161  MerR family transcriptional regulator  94.44 
 
 
74 aa  142  1e-33  Dehalococcoides sp. BAV1  Bacteria  normal  0.137499  n/a   
 
 
-
 
NC_013552  DhcVS_1131  DNA-binding protein, excisionase family  95.71 
 
 
70 aa  141  3e-33  Dehalococcoides sp. VS  Bacteria  normal  0.0470185  n/a   
 
 
-
 
NC_013441  Gbro_1042  DNA binding domain protein, excisionase family  48 
 
 
82 aa  46.6  0.0001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03493  response regulator  40 
 
 
186 aa  43.9  0.0007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4091  DNA binding domain-containing protein  39.34 
 
 
90 aa  42.4  0.002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.446784 
 
 
-
 
NC_009717  Xaut_4864  DNA binding domain-containing protein  34.43 
 
 
274 aa  42.7  0.002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.68065  normal  0.158916 
 
 
-
 
NC_013174  Jden_2349  DNA binding domain protein, excisionase family  42.59 
 
 
79 aa  40.8  0.006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0851  DNA binding domain protein, excisionase family  40.82 
 
 
90 aa  40.4  0.008  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.173739  n/a   
 
 
-
 
NC_003910  CPS_1938  excisionase family DNA-binding response regulator  40.38 
 
 
190 aa  40.4  0.009  Colwellia psychrerythraea 34H  Bacteria  normal  0.440271  n/a   
 
 
-
 
NC_009953  Sare_4511  DNA binding domain-containing protein  41.51 
 
 
88 aa  40  0.01  Salinispora arenicola CNS-205  Bacteria  normal  0.812065  hitchhiker  0.00570166 
 
 
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