11 homologs were found in PanDaTox collection
for query gene Dfer_2147 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_2147  Xylose isomerase domain protein TIM barrel  100 
 
 		 281 aa  575  1.0000000000000001e-163  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.634392  normal  0.651305 
 
 
-
 
NC_013061  Phep_2777  Xylose isomerase domain protein TIM barrel  71.48 
 
 		 295 aa  408  1e-113  Pedobacter heparinus DSM 2366  Bacteria  normal  0.5665  normal  1 
 
 
-
 
NC_013132  Cpin_1808  Xylose isomerase domain protein TIM barrel  67.92 
 
 		 299 aa  382  1e-105  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.011927  normal  1 
 
 
-
 
NC_009441  Fjoh_4077  xylose isomerase domain-containing protein  54.45 
 
 		 300 aa  318  7.999999999999999e-86  Flavobacterium johnsoniae UW101  Bacteria  normal  0.768567  n/a   
 
 
-
 
NC_013730  Slin_5488  Xylose isomerase domain protein TIM barrel  31.15 
 
 		 285 aa  130  3e-29  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.479008 
 
 
-
 
NC_013037  Dfer_3708  Xylose isomerase domain protein TIM barrel  27.86 
 
 		 286 aa  118  9e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013745  Htur_4472  Hydroxypyruvate isomerase  29.17 
 
 		 250 aa  55.5  0.000001  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0435966  n/a   
 
 
-
 
NC_013525  Tter_0323  Xylose isomerase domain protein TIM barrel  22.27 
 
 		 536 aa  50.1  0.00004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_0121  putative L-xylulose 5-phosphate 3-epimerase  29.6 
 
 		 290 aa  44.3  0.002  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_4202  hydroxypyruvate isomerase  30.59 
 
 		 268 aa  43.1  0.005  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.407118 
 
 
-
 
NC_012912  Dd1591_0287  putative L-xylulose 5-phosphate 3-epimerase  24.86 
 
 		 290 aa  43.1  0.005  Dickeya zeae Ech1591  Bacteria  normal  0.790888  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>