| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5488 |
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| Symbol | |
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| ID | 8729256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6680638 |
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| End bp | 6681495 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003390253 |
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| Protein GI | 284040323 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.479008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC GTGATGCACT CCGTTACTCA TTTGGTGCGG GAATTTATGC ACTGACTTAC
GGTGCGTTTG CTCAAACAAA AGTCGACAGC AACCGATTCA GGATTGGTGC CTGTGATTGG
TCAATCGGCC CGGCGGGCGA TATAAAGTCG TTTGCCGTAG CAAAGCAGAT TGGCCTGGAT
GGGGTACAGA TAAGCCTGAA TACAGCGTCG GATCATGAAC ACCTCCGCAA GCCGGAACTT
CAGCGGTTAG TGAAGGAGGC TGCGCAACAG TCGGGCGTTC AGATTGGCGG ACTGGCCATC
GGTATGCTCA ACCAGATTCC GTATAAATCA GACCCGCGTA CTGAAGCCTG GGTACAAGAC
AGCGTAGATG TCGCTAAAGC ACTGGGCGTA AAGAATATTC TTCTGGCCTT CTTCTCGAAC
AACGATTTGA AGAACGACCC GAAAGGCACG AAAGTCGTTA TCGAACGCCT GAAGGCCGTT
GCACCAAAAG CCGAAAAAGC CGGGGTAGTG CTGGGTATCG AGTCCTGGTT GTCGGCGCCT
GAACATTTGG CTATTCTGGA CGCCGTTGGC TCTCCGGCGG TAAAGGTGTA TTACGACGTC
TGCAATTCAT CGGACATGGG GTATGATATT TTTAGCGAAA TCCGGTCGTT GGGTAAAGAC
CGGATCTGCG AAGTTCACCT GAAAGAAAAC GGCTACCTGA TTGGCCATGG AAAAGTCGAT
TTGCATAAGG TTAAACAGGC GCTGGACGAC ATTGGCTATG TAGGCTGGTT ACACCTTGAA
GGGGCCGTGC CCAAAGGGAA ACCGATGTTG GAAAGTTATA TTGAGAATAA TAAAACGGTG
CGAGCGCTAT TCGCCTGA
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| Protein sequence | MNRRDALRYS FGAGIYALTY GAFAQTKVDS NRFRIGACDW SIGPAGDIKS FAVAKQIGLD
GVQISLNTAS DHEHLRKPEL QRLVKEAAQQ SGVQIGGLAI GMLNQIPYKS DPRTEAWVQD
SVDVAKALGV KNILLAFFSN NDLKNDPKGT KVVIERLKAV APKAEKAGVV LGIESWLSAP
EHLAILDAVG SPAVKVYYDV CNSSDMGYDI FSEIRSLGKD RICEVHLKEN GYLIGHGKVD
LHKVKQALDD IGYVGWLHLE GAVPKGKPML ESYIENNKTV RALFA
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