| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1808 |
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| Symbol | |
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| ID | 8357959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2204967 |
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| End bp | 2205866 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963996 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003121505 |
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| Protein GI | 256420852 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.011927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA CAGCAACAAC AAGCAGAAGA CAGTTCATTG GCAATGCCGC CTTGCTGGCA
GGCAGCCTGT TATTGCCTGA TATATTGCTG GCGGCGGTAA AAAAAGAACC GCGTTATCGC
ATTGCAGTAT GTGACTGGAT GATCCTGAAA AGGCAGAAGC TCGGTGCTTT TCAGTTGACC
AAGGATATTG GTGCAGATGG TGTGGAAGTG GATATGGGTG GACTGGGTAA CCGGCCCACC
TTTGACAGCA AACTGTCTGA TCCTGCAGTA ATAAAACAAT TCCTGGATAC CTCCAGGGAG
CTGAATGTAG CGATCAGTTC TATTGCCATG TCCGGTTTTT ATGCACAATC ATTTGCGGAA
CGACCTGAAT ACGAAAAGAT GGTGCAGGAT TGTATCGATA CGATGGTAGC AATGAAAGTG
AAGATTGCTT TTCTTCCTTT GGGTGTTACC GGCGATCTGG TGAAACGTCC GGAGCTGCGT
CCTGTTATCA TACAACGTTT GAAAACAGTG GCTGTCCAGG CAGAAAAAGC AGGTGTGGTG
ATTGGTTTAG AGACAGCCTT ACCCGCAGCA GAAGAAGCAC AGTTACTCGA TGAAGTGGGA
TCATCTGCTG TCAAAAGTTA TTTCAATTTC TCCAACGCAT TGCAGGCAGG CCGTAACCTG
ACAGATGAAT TGAAGACGCT GGGTGCAAAG CGTATCTGCC AGATCCATTG TACGGATACA
GATGGCGTAT GGTTGCAGAA CAATACGCGT ATCAATATGA AGGAAGTAAA AAAGACATTG
GATAAAATGC GCTGGAGCGG ATGGCTGGTG ATTGAGCGTT CCCGTGATGC CAATGACCCT
CGTAATGTAA AGAAGAATTT CAGTGCCAAT GCGGCTTATC TGAAATCTGT ATTCCAGTGA
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| Protein sequence | MAMTATTSRR QFIGNAALLA GSLLLPDILL AAVKKEPRYR IAVCDWMILK RQKLGAFQLT
KDIGADGVEV DMGGLGNRPT FDSKLSDPAV IKQFLDTSRE LNVAISSIAM SGFYAQSFAE
RPEYEKMVQD CIDTMVAMKV KIAFLPLGVT GDLVKRPELR PVIIQRLKTV AVQAEKAGVV
IGLETALPAA EEAQLLDEVG SSAVKSYFNF SNALQAGRNL TDELKTLGAK RICQIHCTDT
DGVWLQNNTR INMKEVKKTL DKMRWSGWLV IERSRDANDP RNVKKNFSAN AAYLKSVFQ
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