| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3708 |
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| Symbol | |
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| ID | 8227293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4519081 |
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| End bp | 4519941 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644931540 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003088078 |
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| Protein GI | 255037457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG GTTTGGTGAT GAACAGGCGG GAAATGCTCA AAAGCACTGC GCTGCTGGTG
GCATCGTCCA TGTTCGATAA CGAAGGCGCC GCCCGGTACC GGATCGGGGC GTGCGACTGG
TCGCTCGGCA AGCAACTGAG CCCCGAGGCC TTTGAGCGGG CGAAACAGAT CGGTCTGAAC
GGCGTTCAGG TGAGTTACAA TACCGGGAAG GACGAAAAAG GCCTTTCGGT ACCCGAAACT
TTGCAGGCCA TCCGCGACGC GTCGGCGCGG ACGGGCGTGA AGGTGTCCAG TCTGGCGATC
GGGGAGCTCA ACCGCGTGCC TTATAAATCG AAGCCGCAAA CGGAGGAGTG GGTCTGGAAC
AGTGTGGATG CGGCCAAAGC ATTGGGCGTA AACGTGGTTT TGCTCGCATT CTTTTCGGAA
GGTGACCTCC GGAATGACGA TGCCGGTAAA AAAGCGGTGA TCAGCCGGTT GAAAAAAGTA
GCCCCGCATG CCGAGCAGCA GGGCATTACC TTAGGCATCG AATCTTGGCT GAGCGGACGG
GAGCATTTGG ACCTTATTCA TGCCGTTGGC TCCAAGGCCG TGAAAGTGTA TTACGATTTC
AGGAATTCTA CCGATGCCGG CCACGACATT TTCAAGGAAA TACCGATGCT CGGCAAGGAC
ATGATTTGTG AAATACATAT GAAAGAAAAT GGCCAGCGCC TGGGCGAAGG CCCCCTCGAC
TGGGTGAAGG TGGCAGCGGC TATGACCGAT ATCGGCTACG ACGGCTGGAT GCAGATTGAA
GGCGCAACGC CGCAGGGGGC CGACATTGTG GAATGCTATC AGCACAACCG AAAATTTCTC
GAAAAGCTAT TTCCAGCCTA A
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| Protein sequence | MKHGLVMNRR EMLKSTALLV ASSMFDNEGA ARYRIGACDW SLGKQLSPEA FERAKQIGLN
GVQVSYNTGK DEKGLSVPET LQAIRDASAR TGVKVSSLAI GELNRVPYKS KPQTEEWVWN
SVDAAKALGV NVVLLAFFSE GDLRNDDAGK KAVISRLKKV APHAEQQGIT LGIESWLSGR
EHLDLIHAVG SKAVKVYYDF RNSTDAGHDI FKEIPMLGKD MICEIHMKEN GQRLGEGPLD
WVKVAAAMTD IGYDGWMQIE GATPQGADIV ECYQHNRKFL EKLFPA
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