13 homologs were found in PanDaTox collection
for query gene Dd1591_2124 on replicon NC_012912
Organism: Dickeya zeae Ech1591



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012912  Dd1591_2124  putative transcription regulator with HTH domain  100 
 
 		 56 aa  115  9.999999999999999e-26  Dickeya zeae Ech1591  Bacteria  normal  0.689275  n/a   
 
 
-
 
NC_009829  Spro_4949  helix-turn-helix domain-containing protein  56 
 
 		 121 aa  67  0.00000000007  Serratia proteamaculans 568  Bacteria  normal  0.827096  normal  1 
 
 
-
 
NC_012560  Avin_31920  transcritional regulatior protein  48.15 
 
 		 125 aa  59.3  0.00000002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_1391  hypothetical protein  46.94 
 
 		 127 aa  49.7  0.00001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0149629  normal  0.0177831 
 
 
-
 
NC_007948  Bpro_1533  transcription regulator  44.9 
 
 		 126 aa  45.4  0.0002  Polaromonas sp. JS666  Bacteria  normal  0.835291  normal  1 
 
 
-
 
NC_010002  Daci_4803  hypothetical protein  38.78 
 
 		 128 aa  45.4  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  0.801839  normal  1 
 
 
-
 
NC_012791  Vapar_2391  putative transcription regulator with HTH domain  41.18 
 
 		 127 aa  45.8  0.0002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007950  Bpro_5485  transcription regulator  42 
 
 		 119 aa  44.7  0.0005  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.184827 
 
 
-
 
NC_010725  Mpop_3482  hypothetical protein  40 
 
 		 141 aa  44.7  0.0005  Methylobacterium populi BJ001  Bacteria  normal  0.299103  normal  0.350202 
 
 
-
 
NC_011760  Mchl_5739  hypothetical protein  41.82 
 
 		 137 aa  44.3  0.0005  Methylobacterium chloromethanicum CM4  Bacteria  n/a    n/a   
 
 
-
 
NC_008783  BARBAKC583_0265  putative HTH-type transcriptional regulator ygjM  40.74 
 
 		 118 aa  43.9  0.0008  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_0265  XRE family transcriptional regulator  42.86 
 
 		 125 aa  43.5  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  0.153911  normal  1 
 
 
-
 
NC_010172  Mext_3283  hypothetical protein  36.36 
 
 		 152 aa  42.4  0.002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
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