Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1391 |
Symbol | |
ID | 4686074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1476696 |
End bp | 1477079 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639834393 |
Product | hypothetical protein |
Protein accession | YP_981626 |
Protein GI | 121604297 |
COG category | [K] Transcription |
COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0149629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0177831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGC CAGACCGCTA CCCCATTCGT CCCATCCGTA CCGACGCCGA TTACCGTGCC GCACTCGCAC TGGTGGCGCC TTATTTTGAC AACGAGCCCG AGATTGACAG TGATGCGGGC GCGCATTTTG AGGCCATGCT GACCTTGATC GAAGCGTATG AGGCCAAGCA TTACCCCATC AGCCCGCCTG ATCCGATAGA GGCGATTCTG TTTCGCATGG AGCAGCAGGG GCTCAAACCC AAAGACCTGG AGCCCATGAT TGGGCAGCGC AACCGGGTGT ACGAGGTGTT GAACCGCAAG CGAAAGCTGA CGCTGGCGAT GGTGTGGCGC CTGCATGTCG GACTGGGCAT TCCGGCGGAG AGCTTGATTC GGCAGCCGGG GTGA
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Protein sequence | MKKPDRYPIR PIRTDADYRA ALALVAPYFD NEPEIDSDAG AHFEAMLTLI EAYEAKHYPI SPPDPIEAIL FRMEQQGLKP KDLEPMIGQR NRVYEVLNRK RKLTLAMVWR LHVGLGIPAE SLIRQPG
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