8 homologs were found in PanDaTox collection
for query gene Cpin_4396 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_4396  peptidase C19 ubiquitin carboxyl-terminal hydrolase 2  100 
 
 
1517 aa  3142    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.20461 
 
 
-
 
NC_010830  Aasi_1805  hypothetical protein  24.29 
 
 
339 aa  60.8  0.0000002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_009045  PICST_59800  predicted protein  29.23 
 
 
489 aa  54.3  0.00002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_006694  CNI00640  conserved hypothetical protein  22.56 
 
 
1209 aa  52.4  0.00007  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.334737  n/a   
 
 
-
 
BN001302  ANIA_03711  ubiquitin C-terminal hydrolase Ubp8, putative (AFU_orthologue; AFUA_6G12710)  23.12 
 
 
484 aa  47.8  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.954307  normal 
 
 
-
 
NC_006670  CNA04350  conserved hypothetical protein  27.97 
 
 
576 aa  46.6  0.003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006693  CNH02890  ubiquitin carboxyl-terminal hydrolase 5, putative  27.82 
 
 
1113 aa  46.6  0.004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009045  PICST_32361  predicted protein  31.75 
 
 
565 aa  45.4  0.008  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.136395 
 
 
-
 
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