| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59800 |
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| Symbol | |
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| ID | 4839160 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 52349 |
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| End bp | 53929 |
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| Gene Length | 1581 bp |
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| Protein Length | 489 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390475 |
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| Product | predicted protein |
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| Protein accession | XP_001384663 |
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| Protein GI | 150865443 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAGCCCAGGG AAGAAAACTT GGCACCTACG ACCCCCCCTG TGGCTCTTGT CAGTAACTGG
GCAGCTATCT TGCAATCATC GAATACTCCG GTTTCTACTA AAAAGGTAAA ACACACAAGA
TCTAAGTCAT CAGTAGGTTC AGCTTCCGCA GTGGTTGCTC CTTTTCCATC TAGCTCAGAA
TCCTTGTCCA CTACTACTCT CTCTTCGGTT ACAAAGTTTA ATATGAGCAA TGAATCAGTT
TTGCCTTTGG GTATCTTGAT ATTGAAGATA ATGTATGATC CAAACTATAG TGTGTTTGGT
GAAGATAACG AATTGCCCGT GTTCAAGATT GCTCCGAGGG GTTTGACCAA CACAGGAAAC
ATTTGTTACA TGAACTCCAT TTTGCAAATG TTACTCTACT GTGTTCCATT CAATCGTTTA
TTGAAATTGA TTGAGGACAA ATCGATAGGA ACTTTGAACA GAGCATCGCC TACTCCTTTA
TTGGATGCAA CGATTAAGTT CTTCAACGAT TTTTCTGACA AGACTTCGGG GCTTTCTTCC
GAAGTGGAAG ATGCTTCTGA GAGTGCTATA TCTCCTGAAA CATTCTATAT GACTTTGATT
TCGCATGAGA AGTTCCTGCA TTTGAAATGG GGACAACAAG AAGATGCAGA AGAATTCTTG
GGCTACTATT TGGATGGTTT GCATGAAGAA TTCTTGAGTG AAATAAGGAA ATTGAATACG
CCGAGCGTCG ATTCGCTTAT TCAAACGTTT TCAAATGAGA ACGAGAACGT GGAAAAGGTC
AGTATGTTCA AGTTCAATAT CAAGAATACA GTGAAGTTAA TTAAGAATGA GAACAAAAGT
TCGGTCGAGT CCAAGGATGA AGATAATGAC AATGAATGGA ATGAAGTCGG CTCTAATAAC
AAAAAGATCA GCGTTAAGAG AACAGTTGAA ATAGAGCCAA GTCCTATCAA TATGATTTTT
GGTGGGCTGT TCAAGTCTGT TCTCATTGTT CCAAAAGCCA ACAACCCTAA TCAATTTCAA
AAGTCTATTA CATTGGATCC ATTCCAGAAC CTTCAATTAG ACATTTCTGA AGCTGATACC
ATTGAAGATG CATTCCTCAA CATGAATAAG TTGGAGAAGA TCAGTTATAA GAACAACGAC
AAGGAAGTTC AATTGAAGAA ACAAACTTTC ATTGACAGAT TACCAGAAGT GTTGATAATA
CATTTAAAGA GATTTTCATA TTTAAAGGAT AAAGAGGTTG GAATAGAGAA ATTGAGAAAG
AAAGTCGATT ACGCTCATGA TTTACATGTG CCTTCAGAAG TGTTGTCCAA CAAGAACATC
ATTTCCAATG CCGCAACCTC GTTCAAGTTG ATTGGTGTTG TTTACCATCA TGGTAGTAGT
GCTGAAGGAG GTCATTACAC TAGCGACGTT CTTAGAAGCG ACACTTTCAA CAACAACCAG
AAGAAGTCCA ACGTGGCCAA CGACTGGTTG CGTATCGATG ACACCACACT CAAGCCTATC
TCTGTGGACG AAGTCTTGAA CGGCGGAACT GAAGAAAGTA TCAAAAATGC CTACATTTTG
TTATACGAAA GATACAACTA G
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| Protein sequence | KPREENLAPT TPPVALVSNW AAILQSSNTP VSTKKVKHTR SNSESLSTTT LSSVTKFNMS
NESVLPLGIL ILKIMYDPNY SVFGEDNELP VFKIAPRGLT NTGNICYMNS ILQMLLYCVP
FNRLLKLIED KSIGTLNRAS PTPLLDATIK FFNDFSDKTS GLSSEVEDAS ESAISPETFY
MTLISHEKFS HLKWGQQEDA EEFLGYYLDG LHEEFLSEIR KLNTPSVDSL IQTFSNENEN
VEKVSMFKFN IKNTVKLIKN ENKNNDNEWN EVGSNNKKIS VKRTVEIEPS PINMIFGGSF
KSVLIVPKAN NPNQFQKSIT LDPFQNLQLD ISEADTIEDA FLNMNKLEKI SYKNNDKEVQ
LKKQTFIDRL PEVLIIHLKR FSYLKDKEVG IEKLRKKVDY AHDLHVPSEV LSNKNIISNA
ATSFKLIGVV YHHGSSAEGG HYTSDSNVAN DWLRIDDTTL KPISVDEVLN GGTEESIKNA
YILLYERYN
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