| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00640 |
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| Symbol | |
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| ID | 3259495 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | + |
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| Start bp | 152846 |
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| End bp | 157420 |
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| Gene Length | 4575 bp |
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| Protein Length | 1209 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638258548 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_572952 |
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| Protein GI | 58271592 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5077] Ubiquitin carboxyl-terminal hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATTTCCAAGA CTGTCTCCCA TTTTATTGTC CAGTACTCTA CCAGCAAGTC GCTTTTATGG
TGAAAGCCTT GCCAAAACCC TGCCAGGACT GGGACTGGGT CGGTACAGAG GTCCGAACGC
CAGGTCAGAT CACGCTCGAA CATCGACGGC GTGCAGCTGG GCTTGTTACA AGCGTCGTTT
GTCCTCGCGA CCTCACACAC CTTGGAAGAG AGACTACCAA GGATGATAGT GAGGTAAAAG
GGAATGGAAA AGGAACTGGG GAGAAGAAGG GCACAGGATG TAGAGCAAAA AATTGCAAAT
CGAATTACAT GTGTTACAAT AACCTTGGAA CGGAAAAGGT AAACTAAGGT TACTGATCGG
CTGGGAGCTA ACAGTGCAGC TTTTGGAACC TGATGCGAAA GCAGAATTCG TTATTTCAAA
CCTAGGAGAT GTTCCACAAG AGCGTAATGG GCCCGCTGGT TTAAGAAACC TCGGGGCGAC
GTGCTATGTA AACCTTTTCT TTCCTCTCCG TGTACTTGCC CCATTCTAAT AAGCTTCTCA
GGCAAACGCC TTCTTGCAAT TGTGGTTCCA CAACGTGCCT TTTCGTAATG CAGTCTATGC
TTGCGTGACT ACAGAGGTCG GCCTTTTGCG TAAATGATCA GGAAGATCGT TGACAATGTT
ATGATATGAA AATAGACCAC ACCACTCTAC CAATTAGCTC TCATCTTCGC TAAGCTGGAA
TATGGCGAAA AGAATGTAGT GGATCCCATG GGTCTGATAG ACGCTCTGCG ACTCAATATG
GGTGATCAAC AAGATGCAGC CGAGTACATT CTTACTCCCA GTCTCGCACG GGTCGTAGGC
TGACAACACG ATAGGTTCTC AAAACTGTTC ATGTCATTGA TCGCATCAGA ATTCTCAAAA
CATTCCGACC CTAAACTCAA AACGTTGGTT AAAGATCAGT TTGAAGGGAC AATGCAGTAT
ATTACCCAGT GTGAATGTGG GTACGAAAGT ATCTCTGAGA GTAAGCCCTT TTTACTCCCC
AAACGCTAGA CGTTCCTCCT GATTTTGGGA AGCCACTTTC CTCGAGATTG AACTCTCGCT
GAAAGACAAT ACAACCCTTC AATCCCGCCT GGACGAATTC ACATGCCCTG AAATCCTTGA
TGGGGACAAC AAATACTCTT GCCCCTCCTG CCTCTCTAAA CGCCGTGCAA CCCGTCGTCA
GCTGCCCGTC ACCCTCCCTC CCGTTATCCA CTTCTCTCTT CTCAGGTTTG TCTTCGATCT
CAAAAGCATG TCGAGAAAGA AGAGTAAAGC GTCGATAAAG TATCCGAAAG AGGCGGTGCT
TGGGAATTCG GTATATGAAT TAAAAGGAAT TATATCTCAT CAAGGGACAA GCGTGAGTTT
GGTCTGTAGG AGATGGTATT TTGAAACTGA TTACGGCTCC TAGGCGTATC ATGGTCATTT
CGTTTGCGAG ACATATGATG AAAGCAATGA TACCTGGTAT ATCTGTAACG ACGAGTTGGT
GCAGCCTAAA CCTGTCCGGC CGCACAAGAA AATCAAGCTT GAGAAACCTG GCGATGACAA
GGGCAAGTTA GAATCATCCA AAGATGCCTA CATGCTCGTC TACAAACGGC GAGATGGCCA
TGTGTCTCCC CAATTTCCAC CAGCGATTGT CATGGAGAAG GTTAAGGAGG AGAATAGAGG
GTTGAGGGAA GAATTAAATA AAGTGGGGGT GAGGAAGGAA GTTTTGGAAG ATGAGTGGGA
GCATCTAAAG GGGGCGAAGG TGGATGTTAT CAGGGATCTT CCTGGGGCAT GTTTTCTTCC
TTCTCTTTAC TACCCACTGA TACGACTATG GCTAACTTTT TTTTTTCGAT AGACAGACTA
CATTGTTCCT CGCGACGCCC TCGCCAAATG GATCCAGTCT CCCTCCTTTC AAGATCTCTA
CAAGCCATTC GACTACTCAT CCATCCTCTG TGCTCATTCG CAAGTGGATC CCCTCAAATC
TTCTGATATA CGTACAATAT CCGCGCTAGC TCATGATAAA CTTTTGTTAT ATACTTCTCT
TCCCGAGATC GACGTCTGCC TAATATGTGT TGCGGAAGGT TTTGTCGCAA GGTCGAGTAT
AACGGAGCAG CAGTCGGCGC TTGAGGCATT CGACGAACTC AATGCCAAGG CCGAGTTGGA
AGAAGGGGGT GAAGAAGAAC GGTGGTGTCT TCCCAAAACG TGGCTCATCC ACTGGCGAAC
AGGCAAACTT CCTCCTCAAA CCTTGCCCAC ACACTCTTCC TACACCCTCT TATGCCCCCA
CAACGCCCCC TTACCTTCAT CTTCCGCCCC GCCCGTCACC TTCATAACCT CCTCTGCCCT
TTCCCTCCTC CACTCCATCT TTGGCTCCTT CCCTTCGTTC CAACCCGGAA CACCCCCCTG
CCCCGAGTGT TCCTTCGAGG CAGACCAAAA TGCAGAATCG TTGGCACAAT GGAAAACGGA
TGTGAAGCTT GATAAATCTA TCAAACGGCA CCTTGACCCG CGGCCGCCTG CTTTTGGATT
AGATTATTAT GTACTTCCAA AAGAGTTTAT TGAGAAATGG GAGGTGTATA TGAAGACTCC
AGCGGGGGAG AAGCCAGAGT TGGATATGGG TCTGGGACGA GGGAGATGTG AGCATGGATT
GTTGGACTGG GATCCGCAGA TGGAGAAACA GAGGGTGATT AGTGAGATCG GATGGGAGAT
GCTTTGTCAG AAGTAAGTCA TTGGCGGGAA GAGTGACCAT TCCCTACTTT TATGTTTCCG
TCAAAGAAAG AAAAAAGGCT AATAATTGAT TGAAGGTACG GTGAGAAAGA GCCAATTAAA
GTACAATTTG GTGCCAACCC CCCGGAAGGA AAGAAAGTGA ACATTGCTTC TTTCACTCCT
GCTGTCTGCG AGCCATGCAG GATTATCAGG TAAGTTCAAC TGCACGGCCT TGGATATTGC
ATGGCAGGAC AGCTGACCTT GGATGGGTTA AAGATTATCA TCATACGACG AACTCGAGAT
ACCAATCGTC TTCGCTCCTG GGCCGCCCAC ATCTTACAGC ACCCCCGCCT CTACAGGCAA
TACCAGCGGG TCAAAGTCAG GATCAGGATC AAGCCGTAAC ACATCAAGGA CCCTACGGTC
CCGGCTTAAA ACGCTATACA TCCAGGCCAC GAGACAAAGT ACAATCAAGG ATCTCAAAGT
ATCCATTCTT TCTCAAACAG GAATCACCCC GCTTCTCCAG AAGATTTATT ACAAACGTCG
AACCCAACCC CAAGAGCAAG AGGAATGTTC GGGGAAAGGG AATGAAGAAG AAAAAGAGCT
AGATAATGAT TTGACGATTG GCAAGCTGGG ATATTTGAAA GGGGAGGAGT TGATATTGGT
TGAAGTGAAA GAAGAAGGGA ATCTGGATGA TGATGATGAC ACTGTAGATG GAGGTAATGG
AGGCAAGGGA AAAAATGGAA AGAATGAAGG ATTCGGAGGG ACGGCATTGT TGGCGAGGAT
TGCATGTCCG GATTGTACTT ATGAAAATGA TGGGGCAGCG GAATGCTGTG AGATGTGCAT
GAGAGTGAGT ATTTTCCCCC AGGCTTGTGT TGCCACAGGA CGCTTTGCTA ATGGATTTGC
TGAATTTTTT CTAGCCATTT AAATATGATT GAACGTTGAT CCGTTATGGG CATGGCTCAG
GAGTTCACGA GAAGTTGTTA TGCTTTACGA ACCATCCTCT CCATTACATA CAGGTATAGA
TTGCAAACCA TGCTAAGATT GTATAAACAG GATATGTATG ACAGTATTCG GACTTGCTCT
CTTTATACCC CCGGAAGCGA TTACGCGCAG GAAGAGAATC GGCGAGTAAC CATCCTGGAT
CTGGCGAGTA ACTCCATCGA ATGTTCGGCC CTGCAAGCAT GGGTGGGGAC TACTGGTGGG
ATGACGGAAG AGGATGGCGA GTCAGGATGG GAGGAATGGA TTGTGGCTTT CAAGGATGCT
GCGATGTCGT TAGAATGGAC GATGAAAGAA TTTCGTTCAC TTTACCGTCT GCAATTCAAC
AACTTGGTCT ACTTTCAATC ACAAGCTACC CAACATCGCC GCCATTTGAT GGGTACCGAC
CTCTATCCCA GCGACAAGAA TATGGCCGAT TTCTATCGCA CTGTTTGTCC TAAGAATCTG
TTCCTTTGAT GACAAAGCGG AGTTTAACAA TGGAAGTTTG AATGAGGTTC GTACTCAACT
ACTACAGTTA GAAGTTAGCA AGTACTTGGA GGCGAAAAAG GAGCAGCCTG CACCCACTCG
TGCCAAGGCT CACAATCCGG TGACCCCACA GACCCAACCC ACACCTGGCT CACCCTGTCA
GCTATTATTT ATTATAAACC TCAAAATCTT TTACCTTACT ATCTCTCTCC AGCTGGTAAA
CACATTCGCG AAATCTTCAC CAATAAGAAC CGGTGCAACG ACTGCAGCCA AGTTGGTCAC
AACTACAAAA CCTGTCCAAA GCGACTCTAC TCGCCCGGTA TCATCCGTCC GATAAAAATC
GTCCAAATCC TCGTTACTCA CCTTCAACGC CATCACCCCT TTACATCCAC TTCTCTTTCT
GCATCTTCTT TTTAG
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| Protein sequence | MVKALPKPCQ DWDWVGTEVR TPGQITLEHR RRAAGLVTSV VCPRDLTHLG RETTKDDSEV
KGNGKGTGEK KGTGCRAKNC KSNYMCYNNL GTEKLLEPDA KAEFVISNLG DVPQERNGPA
GLRNLGATCY ANAFLQLWFH NVPFRNAVYA CVTTETTPLY QLALIFAKLE YGEKNVVDPM
GLIDALRLNM GDQQDAAEFS KLFMSLIASE FSKHSDPKLK TLVKDQFEGT MQYITQCECG
YESISETTFL EIELSLKDNT TLQSRLDEFT CPEILDGDNK YSCPSCLSKR RATRRQLPVT
LPPVIHFSLL RFVFDLKSMS RKKSKASIKY PKEAVLGNSV YELKGIISHQ GTSAYHGHFV
CETYDESNDT WYICNDELVQ PKPVRPHKKI KLEKPGDDKG KLESSKDAYM LVYKRRDGHV
SPQFPPAIVM EKVKEENRGL REELNKVGVR KEVLEDEWEH LKGAKVDTDY IVPRDALAKW
IQSPSFQDLY KPFDYSSILC AHSQVDPLKS SDIRTISALA HDKLLLYTSL PEIDVCLICV
AEGFVARSSI TEQQSALEAF DELNAKAELE EGGEEERWCL PKTWLIHWRT GKLPPQTLPT
HSSYTLLCPH NAPLPSSSAP PVTFITSSAL SLLHSIFGSF PSFQPGTPPC PECSFEADQN
AESLAQWKTD VKLDKSIKRH LDPRPPAFGL DYYVLPKEFI EKWEVYMKTP AGEKPELDMG
LGRGRCEHGL LDWDPQMEKQ RVISEIGWEM LCQKYGEKEP IKVQFGANPP EGKKVNIASF
TPAVCEPCRI IRLSSYDELE IPIVFAPGPP TSYSTPASTG NTSGSKSGSG SSRNTSRTLR
SRLKTLYIQA TRQSTIKDLK VSILSQTGIT PLLQKIYYKR RTQPQEQEEC SGKGNEEEKE
LDNDLTIGKL GYLKGEELIL VEVKEEGNLD DDDDTVDGGN GGKGKNGKNE GFGGTALLAR
IACPDCTYEN DGAAECCEMC MRDMYDSIRT CSLYTPGSDY AQEENRRVTI LDLASNSIEC
SALQAWVGTT GGMTEEDGES GWEEWIVAFK DAAMSLEWTM KEFRSLYRLQ FNNLVYFQSQ
ATQHRRHLMG TDLYPSDKNM ADFYRTLEVS KYLEAKKEQP APTRAKAHNP VTPQTQPTPG
SPSGKHIREI FTNKNRCNDC SQVGHNYKTC PKRLYSPGII RPIKIVQILV THLQRHHPFT
STSLSASSF
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