8 homologs were found in PanDaTox collection
for query gene Cmaq_0135 on replicon NC_009954
Organism: Caldivirga maquilingensis IC-167



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009954  Cmaq_0135  MarR family transcriptional regulator  100 
 
 
145 aa  295  2e-79  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_1735  MarR family transcriptional regulator  41.73 
 
 
149 aa  98.2  3e-20  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.560493 
 
 
-
 
NC_008701  Pisl_0572  MarR family transcriptional regulator  39.86 
 
 
146 aa  92.4  2e-18  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.280849  hitchhiker  0.000973334 
 
 
-
 
NC_009376  Pars_1742  MarR family transcriptional regulator  38.73 
 
 
146 aa  90.1  9e-18  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.367615  decreased coverage  0.000262536 
 
 
-
 
NC_010525  Tneu_1562  MarR family transcriptional regulator  39.26 
 
 
146 aa  90.1  1e-17  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_008698  Tpen_0370  hypothetical protein  33.33 
 
 
137 aa  61.6  0.000000003  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_010085  Nmar_1396  hypothetical protein  25.69 
 
 
291 aa  42.7  0.002  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009051  Memar_1565  hypothetical protein  26.92 
 
 
112 aa  40.4  0.007  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>