| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1735 |
|---|
| Symbol | |
|---|
| ID | 4909628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1615484 |
|---|
| End bp | 1615933 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640125482 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001056618 |
|---|
| Protein GI | 126460340 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.560493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTTTG TGTCTTCCCA GGAATATACA GAGGAGAGTG ATGTATTAAC CGAGGTGGAG
GTGCAAATTT TACAGGGGCT TGAGAGACTT GGCGGAAGCT ACCAGCAGAG GAACTTGTGG
AAGTACATTG GGATAGATAG TAAAACTGGT CTGCCCATCT TGGCGAGGCT TGAGAAGCGG
GGGTTGATAG TCAGAGAGCG CGTCGGTGGG AATAAACGCG GCGTATATAC GATAAGGCTG
ACGGAGAAGG CCTATAAACT GCTCAGCAAG CTGAGGGAGG AGGCTGTTGA GACTTTTAGA
GTTGATGAAA GCTCGCTACC GGAGGAGCTT AGGCTTCTTC TATCTATACC GTGCACCTAC
TGTCCATACT CGGACAAATG CGGCGTAAGC TTTATCTCTC CCCAGAACTG CGAATTGTTC
GCCCGGTGGT CTTACAGGCT TAGGGTATGA
|
|---|
| Protein sequence | MLFVSSQEYT EESDVLTEVE VQILQGLERL GGSYQQRNLW KYIGIDSKTG LPILARLEKR
GLIVRERVGG NKRGVYTIRL TEKAYKLLSK LREEAVETFR VDESSLPEEL RLLLSIPCTY
CPYSDKCGVS FISPQNCELF ARWSYRLRV
|
|---|
| |