Gene Nmar_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1396 
Symbol 
ID5773194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1278308 
End bp1279183 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content33% 
IMG OID641317042 
Producthypothetical protein 
Protein accessionYP_001582730 
Protein GI161528904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AAAAAGAAGA ATTAGTTGAT GAAGCAAAGA AAATCAAAGC AGAAATTGAT 
GCATTAAAAA AGAAAACAGA GATTCTAGAT TCAAAACCTA AAAAATCTAC AAAGAAAGCA
GAAGCAAAAC CTACAAAGAA AACAACAAAG AAAGCAGAAG CAAAACCTAC AAAGAAAACA
ACAAAGAAAG CAGAAGCAAA ACCTACAAAG AAAACAACAA AGAAAGCAGA AGCAAAACCT
ACAAAGAAAA CAACAAAGAA AGCAGAAGCA AAACCTACAA AGAAAACAAC AAAGAAAGCA
GAAGCAAAAC CTACAAAGAA AACAACAAAG AAAGCAGAAG CAAAACCTAC AAAGAAAACA
ACAAAGAAAG CAGAAGCAAA ACCTGAAAAA CCTAAAAAAT TAACCAAAAA AGAATTAGAA
GAGCAAAAAA GAATCGAAGA ATTAACCCCT GAGGAAGAAT TAGAAGAGCA ATTATCTGAT
GAAGAAATTG AAAATTTCCA AATAGAAAAA GTAGACATGG AAAGACTCAC AAACAAAGTC
TGTGATATTT TGGCTGAACG TGAATCAGAA GGAATGTTTC AAAGTGAATT GTGGAAGAAA
CTCAAACTTA CAAGTCGTGA TGGTTCCCGT CTGTCATTAA AACTTGAAAG AATTGGTTTT
ATCACTAGAG AAAAAATGCT TGAAAAGAAT CGTTGGACAT ACAAATTAAT TTTAAAGAAA
ACTCCAATTA GTACACAGTC AATTGAAAAT TCTCCCTGCT TGGTTTGTCC TGTTGAACAG
AAATGCTCAC TTGAAGGTGA AATCAGTCCT AGAAACTGCC AATTCATTGA AGATTGGGTA
ATTGCTGAGA TGAAAAAACC TGCGAAGGCC AAATGA
 
Protein sequence
MAKKKEELVD EAKKIKAEID ALKKKTEILD SKPKKSTKKA EAKPTKKTTK KAEAKPTKKT 
TKKAEAKPTK KTTKKAEAKP TKKTTKKAEA KPTKKTTKKA EAKPTKKTTK KAEAKPTKKT
TKKAEAKPEK PKKLTKKELE EQKRIEELTP EEELEEQLSD EEIENFQIEK VDMERLTNKV
CDILAERESE GMFQSELWKK LKLTSRDGSR LSLKLERIGF ITREKMLEKN RWTYKLILKK
TPISTQSIEN SPCLVCPVEQ KCSLEGEISP RNCQFIEDWV IAEMKKPAKA K