Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1742 |
Symbol | |
ID | 5054979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1567963 |
End bp | 1568403 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640469285 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001153945 |
Protein GI | 145591943 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.367615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000262536 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCCGCTC AGGAATATAA TGAGGAGTCT GACGTACTGA CAGAGGTGGA GATCCAGATA CTTCAAGGTC TCGAAAGGTT GGGAGGTAGC TACCAGCAAC GCAACTTGTG GAAGTACATT GGCATCGACA GCAAGACCGG GCTCCCCATC TTGGCGCGGC TAGAGAAAAG GGGGTTAATC GTGAGAGAGA GGGTTGGGGG AAATAAGAGA GGCATGTATA TTATTAGGCT TACCGATAAG GCGTATAAGA TATTGAGCAA AATACATGAG GAGGCCGTCG AGACTTTTGT CTTGAATATC GACGCCTTGC CGGACGAGTT GAGGCTTCTT CTCACAAGCC CTTGCACATT TTGCCCATAC TCGGACAAAT GCGGCGTAGG GTTTATAGCG CCGCACGCCT GTGAACTTCT TGCCAGGTGG GTACGCCAGG TTGATATATG A
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Protein sequence | MAAQEYNEES DVLTEVEIQI LQGLERLGGS YQQRNLWKYI GIDSKTGLPI LARLEKRGLI VRERVGGNKR GMYIIRLTDK AYKILSKIHE EAVETFVLNI DALPDELRLL LTSPCTFCPY SDKCGVGFIA PHACELLARW VRQVDI
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