Gene Pars_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1742 
Symbol 
ID5054979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1567963 
End bp1568403 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content50% 
IMG OID640469285 
ProductMarR family transcriptional regulator 
Protein accessionYP_001153945 
Protein GI145591943 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.367615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000262536 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCCGCTC AGGAATATAA TGAGGAGTCT GACGTACTGA CAGAGGTGGA GATCCAGATA 
CTTCAAGGTC TCGAAAGGTT GGGAGGTAGC TACCAGCAAC GCAACTTGTG GAAGTACATT
GGCATCGACA GCAAGACCGG GCTCCCCATC TTGGCGCGGC TAGAGAAAAG GGGGTTAATC
GTGAGAGAGA GGGTTGGGGG AAATAAGAGA GGCATGTATA TTATTAGGCT TACCGATAAG
GCGTATAAGA TATTGAGCAA AATACATGAG GAGGCCGTCG AGACTTTTGT CTTGAATATC
GACGCCTTGC CGGACGAGTT GAGGCTTCTT CTCACAAGCC CTTGCACATT TTGCCCATAC
TCGGACAAAT GCGGCGTAGG GTTTATAGCG CCGCACGCCT GTGAACTTCT TGCCAGGTGG
GTACGCCAGG TTGATATATG A
 
Protein sequence
MAAQEYNEES DVLTEVEIQI LQGLERLGGS YQQRNLWKYI GIDSKTGLPI LARLEKRGLI 
VRERVGGNKR GMYIIRLTDK AYKILSKIHE EAVETFVLNI DALPDELRLL LTSPCTFCPY
SDKCGVGFIA PHACELLARW VRQVDI