Gene Pisl_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0572 
Symbol 
ID4617561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp527196 
End bp527636 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content43% 
IMG OID639783662 
ProductMarR family transcriptional regulator 
Protein accessionYP_930093 
Protein GI119872086 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.280849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000973334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGACAC AAGAGTTTGC AGAAGAGTCT GATGTACTTA CTGAGGTTGA GATACAGATA 
TTACAGGGGC TTGAGAGACT TGGCGGTAGC TATCAACAGA GGAATCTCTG GAAGTACATT
GGAATAGATA GTAAGACCGG CCTACCCATA CTCGCTAGAC TTGAAAAAAG AGGACTCATA
GCGAGAGAAA GAGTTGGCGG AAACAAACGA GGTGTATACA TAGTAAGATT GACTGAGAAG
GCATATAGAC TGCTTAGTAA AATACATGAG GAGACAGTAG AGGCCTTTAT AGTAGATTTT
GACGCCCTCC CAAATGAGCT TAGAACTTTG TTATCAATAC CCTGTGTATA TTGTCCATAT
TCTGACCGAT GCGGCGTTAG TTTCATAACC CCCCTTACAT GCAACTTATT GACTAAGTGG
CTACATAACC TGAGGTCATG A
 
Protein sequence
MATQEFAEES DVLTEVEIQI LQGLERLGGS YQQRNLWKYI GIDSKTGLPI LARLEKRGLI 
ARERVGGNKR GVYIVRLTEK AYRLLSKIHE ETVEAFIVDF DALPNELRTL LSIPCVYCPY
SDRCGVSFIT PLTCNLLTKW LHNLRS