Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0572 |
Symbol | |
ID | 4617561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 527196 |
End bp | 527636 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639783662 |
Product | MarR family transcriptional regulator |
Protein accession | YP_930093 |
Protein GI | 119872086 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.280849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.000973334 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGACAC AAGAGTTTGC AGAAGAGTCT GATGTACTTA CTGAGGTTGA GATACAGATA TTACAGGGGC TTGAGAGACT TGGCGGTAGC TATCAACAGA GGAATCTCTG GAAGTACATT GGAATAGATA GTAAGACCGG CCTACCCATA CTCGCTAGAC TTGAAAAAAG AGGACTCATA GCGAGAGAAA GAGTTGGCGG AAACAAACGA GGTGTATACA TAGTAAGATT GACTGAGAAG GCATATAGAC TGCTTAGTAA AATACATGAG GAGACAGTAG AGGCCTTTAT AGTAGATTTT GACGCCCTCC CAAATGAGCT TAGAACTTTG TTATCAATAC CCTGTGTATA TTGTCCATAT TCTGACCGAT GCGGCGTTAG TTTCATAACC CCCCTTACAT GCAACTTATT GACTAAGTGG CTACATAACC TGAGGTCATG A
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Protein sequence | MATQEFAEES DVLTEVEIQI LQGLERLGGS YQQRNLWKYI GIDSKTGLPI LARLEKRGLI ARERVGGNKR GVYIVRLTEK AYRLLSKIHE ETVEAFIVDF DALPNELRTL LSIPCVYCPY SDRCGVSFIT PLTCNLLTKW LHNLRS
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