13 homologs were found in PanDaTox collection
for query gene Bphyt_5985 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_5985  hypothetical protein  100 
 
 
95 aa  185  2e-46  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.425207 
 
 
-
 
NC_007952  Bxe_B2220  hypothetical protein  92.63 
 
 
95 aa  175  2e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.168065  normal 
 
 
-
 
NC_007951  Bxe_A2598  hypothetical protein  60.64 
 
 
90 aa  107  4.0000000000000004e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.110866  normal 
 
 
-
 
NC_010681  Bphyt_1706  hypothetical protein  50.59 
 
 
98 aa  75.1  0.0000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.728513  normal 
 
 
-
 
NC_010623  Bphy_4611  CsbD family protein  48 
 
 
88 aa  73.2  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.279751  normal  0.170316 
 
 
-
 
NC_010676  Bphyt_5643  CsbD family protein  44.16 
 
 
80 aa  58.2  0.00000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.595165  normal 
 
 
-
 
NC_010084  Bmul_2001  CsbD family protein  37.33 
 
 
82 aa  48.9  0.00002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.992025  normal 
 
 
-
 
NC_011894  Mnod_3914  CsbD family protein  46 
 
 
116 aa  47  0.00009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6962  hypothetical protein  43.33 
 
 
122 aa  46.6  0.0001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.152901  normal 
 
 
-
 
NC_010172  Mext_0364  CsbD family protein  41.51 
 
 
124 aa  41.2  0.005  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0395  CsbD family protein  41.51 
 
 
113 aa  41.2  0.005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6209  CsbD family protein  39.62 
 
 
109 aa  40.8  0.006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0279  CsbD family protein  39.62 
 
 
109 aa  40.4  0.009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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