10 homologs were found in PanDaTox collection
for query gene Apar_0871 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013203  Apar_0871  hypothetical protein  100 
 
 		 1042 aa  2150    Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.124792 
 
 
-
 
NC_013204  Elen_1243  ATP-dependent nuclease subunit B-like protein  26.73 
 
 		 968 aa  286  1.0000000000000001e-75  Eggerthella lenta DSM 2243  Bacteria  normal  0.0167838  normal  1 
 
 
-
 
NC_013165  Shel_08480  RecB family exonuclease  25.12 
 
 		 889 aa  199  2.0000000000000003e-49  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.198348 
 
 
-
 
NC_013170  Ccur_00780  hypothetical protein  23.44 
 
 		 990 aa  191  5.999999999999999e-47  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009051  Memar_1499  ATP-dependent nuclease subunit B-like protein  23.16 
 
 		 1049 aa  49.3  0.0004  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1570  ATP-dependent nuclease subunit B-like protein  29.63 
 
 		 1043 aa  48.5  0.0006  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002967  TDE0086  hypothetical protein  21.38 
 
 		 945 aa  47.4  0.001  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2897  hypothetical protein  25.27 
 
 		 846 aa  46.6  0.002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1804  ATP-dependent nuclease subunit B-like protein  25.47 
 
 		 986 aa  47.4  0.002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_2264  exonuclease-like  23.27 
 
 		 856 aa  45.4  0.006  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
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