15 homologs were found in PanDaTox collection
for query gene Shel_08480 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_08480  RecB family exonuclease  100 
 
 
889 aa  1823    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.198348 
 
 
-
 
NC_013204  Elen_1243  ATP-dependent nuclease subunit B-like protein  35.82 
 
 
968 aa  447  1.0000000000000001e-124  Eggerthella lenta DSM 2243  Bacteria  normal  0.0167838  normal 
 
 
-
 
NC_013170  Ccur_00780  hypothetical protein  28.6 
 
 
990 aa  331  3e-89  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0871  hypothetical protein  25.12 
 
 
1042 aa  199  2.0000000000000003e-49  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.124792 
 
 
-
 
NC_009051  Memar_1499  ATP-dependent nuclease subunit B-like protein  27.54 
 
 
1049 aa  54.7  0.000007  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_012669  Bcav_1570  ATP-dependent nuclease subunit B-like protein  26.05 
 
 
1043 aa  54.7  0.000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0765  hypothetical protein  24.8 
 
 
1100 aa  53.9  0.00001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.166845 
 
 
-
 
NC_009379  Pnuc_1306  hypothetical protein  25.11 
 
 
994 aa  50.1  0.0002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.791013  n/a   
 
 
-
 
NC_007519  Dde_1587  hypothetical protein  26.79 
 
 
997 aa  48.9  0.0004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_1321  methyltransferase type 11  24.2 
 
 
915 aa  48.9  0.0004  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_013739  Cwoe_1804  ATP-dependent nuclease subunit B-like protein  24.73 
 
 
986 aa  48.1  0.0006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0086  hypothetical protein  25.26 
 
 
945 aa  47.4  0.001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0757  hypothetical protein  26.96 
 
 
259 aa  46.6  0.002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2324  exonuclease-like protein  25.5 
 
 
864 aa  45.4  0.004  Variovorax paradoxus S110  Bacteria  normal  0.884454  n/a   
 
 
-
 
NC_008751  Dvul_1165  hypothetical protein  27.78 
 
 
984 aa  45.1  0.006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.5757 
 
 
-
 
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