| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0086 |
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| Symbol | |
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| ID | 2741701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 101129 |
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| End bp | 103966 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637158956 |
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| Product | hypothetical protein |
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| Protein accession | NP_970703 |
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| Protein GI | 42525605 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA TAGAACAAAC AATAAAGACT TATGGAAGAG ATTTACAAAA TGTTTTTGTA
TTTCCTTCGA GGATTGCTTC AAGGTTATGG TTTCAAAAAT CGCTTAACAT TACCGGATTG
GGGACTGTCC CTTCTGAAAA TTATATGTCG TGGGACGGTT TTAAAGAATC TTGTCTTGTC
TCTAAAGCCT CTTCTTTAAG TCCCGTATCA AATACGGTGC GCAGAATTTT TGCCCAATAT
ATAAGCCGTA TTAATTCGGA AAAGGCAAAA GATGGAGAGC CTCTGTTTAA ATTCCTTATC
CCGCAAGACT ATGCCGAAAC GGGTGCCGTA TTTTCCGAAT GGATTGCAGG GATTTTGCCG
CAGCTCGATC ACTTTGAAAA ACGTTATGCC GATAAAGGTT CCGATTTTTT AGAAGATGAT
GAAATGAAGG ACTATCTTGT TTTAAAGAAT GAGTATACCG ATTTTTTAAA AAAGAATTCT
TTGTTTGAGC CTTCTTGGGT TTCTTCGGAA TTTTATTCAT ATCAAAAAAA ATATATTATT
ATTTATCCCG AATTGATGGA AGATTTTGGT GAACATGCGG AGCTTTTAAG GCAGCAAAAA
GAAATAAGCT ATATTCCATG TCCTAGATTC AATCAAAAGA AAAACTTAAT TGATGTTTAT
AAAAATTCCA GAAGCGAATT AAAAAATACG GTTTTACAAA TTGAAAAACT TCTCAGTGAA
GGAGTGCGAG CCGATGAGAT TGCCGTAAGT GTTCCCGATA TTGAAAACTA TGCAGCTTAT
ATAAAAAGAG AATTTTATCT TAGAGGGATT CCTGCTGAAT TCCGATCGGG TTTTAAGTTG
GGGCTTGAAC AAGCCGGTAA ACTTTTTTCT CTTATTTATG ATTGTGTGCA AAATAATTTT
GCTTTTGAAT TTATGAAGCC TATTGTTTTA AATAAGCATA TTCCTTGGAA GGATAGGGAA
GGGGCTGAAG CCTTAATAGA TTACGGCATA AAGAATAATT GCGCAGTATC GTGGAAAGAA
AATAAAGAAG ATACTGTTTA TAAAAATATT TGGATAGAAT CTTTTAAAAT AAATTATGAA
AGAGATGAAA TTGAAGTTGA GCAAAAGAAA AAAGCGAGAG ATTGGTTTTA TAGTTTTTAT
TATGTCGTAA ATAGAATTTG CGAATCTAAA ACTTTTGCAG ATTTACAAAA AAATTATTTT
TTATTCAGAA ATGAATTGAT AGATGAAAAT CTTTTTTCCG AAAAAGATAA TGCAATCTTG
GGCCGTTGTA TTTCTTGTCT TCAAGAACTT TTATATTTGG AAGATAAGTT TGAAGCCTAC
ATGCCCTGTG ACAGGTTTAA GTTTTTTATT TCGGAATTGG ATAAGGCTAT CTATGTTCCT
CAAAATACAG GGCTTGCCGT AAGTATATTT CCTTACAGAG TTGCCGCTGC TACTCCTTTT
AGCTATCATT TTGTTTTAAA TTGCAGTCAA GACCATACAA ATATTATTTA TAATAAACTT
TCTTTTTTGC GTAAGGATAA AAGAGAAGCC TTGGGTGTTT TTGAAACCGA TGCATCACCG
TATTTTTTTG AAGCCTATAC AGAATCTCCA AATACTGTTT TTAGTTTTAG TCCTCATAAT
TTTAATTCGT ATTTGATTAT AAATAATCTT TTTGAAATTT CGGAAGACGA AGAAATTAAA
AATGCTGAAC GGGTAAATAA AAAAACAGAA GAATTAAAAT CCTATGATTC TTTTTTATTC
GATTATCCCG AGAAGAAAGA AGATTACTCA GAGAAAACTT CTGCAATATA TAAGATTCAA
AAAAATGCAG CCTCAACATT TTCTACATTA AAGAGGAAAA AAGATTTTTC TTATTTGCAA
AATTCATACG ATAGGATTAG CGAAGAATTA AATTCGTATA TGGAGAAAAA TTTATTTAAG
GAAGGTTCTC TTAAATTAAG TCAAACCGAT TTAAAAATAT TTACCGAGTG TCCCGTTTTA
TGGTTTTTAG AAAAAGTTCT TTCCGTCTTT TCGGAAAACT ATGATGCCGA TATCTTTGAT
GCCAGAAATA TCGGCAACCT TTCGCACAAT GTTTTGGAAG TTCTTTATAA AGAGATAGGT
TCAACGGATA AATATTTTAA TTCTAAAAAC TTAGATAATT ATATTGAAAG AGCTTCTTTA
ATATTCGATG ACCTTGCAGA AAAATCCATG GATTTTAGAG GTGCTTTGGC AAAGCCGTTT
ATTCAATCTT TAAAAAAAAG GGTGATGGAA GCCGTCAGCT TTGTTTTAGA AAGCGATGCT
TCGCTTTTGG ACGGATATGA ACCTAAATGG GTAGAAGAAT GGATAGAAAT GGAAAATGAC
GGCATTTTAT ATCGGGGCAA AATAGATAGA GCTTCTTTTC CGCAAGATGG GAGGAGCGGA
GTAATTATAG ATTATAAAAC AAATAATATG CCGGCCTATT CTTCATATGG TAAAAAAAAT
TCAACTGCGG AAGAAATAGA ATTGACAGAT TTTCAGATAC CAATGTATAT CTTCTTGGCT
GAATCCAGAT TAAAAAAGGA TTCAACAAAA GAAAAGAAAA ATTTTGAAAC TATAGAACAT
GCATGGTTTT TAAGTTTTGT GCAGCAAAAA ATAAACAAGG TTGTAAACGA TAATGAAGCT
ATTCCGGTTA CACGGAGCGG ATCTGAAAGA TCACGTGAAG ATTTTCAATC TTCAATCGAC
GCATTTATTA ATGAAGCGGA AAGATTTGTA GAGCTTGTAA AGAATCAAGA TTTTACAAAA
CCTTCTTCAG TTTCATTTGA AACATGCAGT ACATGCGGGT TTAAACATAT TTGCAGAACA
GCTTATTCGG TTAAGTAA
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| Protein sequence | MNLIEQTIKT YGRDLQNVFV FPSRIASRLW FQKSLNITGL GTVPSENYMS WDGFKESCLV
SKASSLSPVS NTVRRIFAQY ISRINSEKAK DGEPLFKFLI PQDYAETGAV FSEWIAGILP
QLDHFEKRYA DKGSDFLEDD EMKDYLVLKN EYTDFLKKNS LFEPSWVSSE FYSYQKKYII
IYPELMEDFG EHAELLRQQK EISYIPCPRF NQKKNLIDVY KNSRSELKNT VLQIEKLLSE
GVRADEIAVS VPDIENYAAY IKREFYLRGI PAEFRSGFKL GLEQAGKLFS LIYDCVQNNF
AFEFMKPIVL NKHIPWKDRE GAEALIDYGI KNNCAVSWKE NKEDTVYKNI WIESFKINYE
RDEIEVEQKK KARDWFYSFY YVVNRICESK TFADLQKNYF LFRNELIDEN LFSEKDNAIL
GRCISCLQEL LYLEDKFEAY MPCDRFKFFI SELDKAIYVP QNTGLAVSIF PYRVAAATPF
SYHFVLNCSQ DHTNIIYNKL SFLRKDKREA LGVFETDASP YFFEAYTESP NTVFSFSPHN
FNSYLIINNL FEISEDEEIK NAERVNKKTE ELKSYDSFLF DYPEKKEDYS EKTSAIYKIQ
KNAASTFSTL KRKKDFSYLQ NSYDRISEEL NSYMEKNLFK EGSLKLSQTD LKIFTECPVL
WFLEKVLSVF SENYDADIFD ARNIGNLSHN VLEVLYKEIG STDKYFNSKN LDNYIERASL
IFDDLAEKSM DFRGALAKPF IQSLKKRVME AVSFVLESDA SLLDGYEPKW VEEWIEMEND
GILYRGKIDR ASFPQDGRSG VIIDYKTNNM PAYSSYGKKN STAEEIELTD FQIPMYIFLA
ESRLKKDSTK EKKNFETIEH AWFLSFVQQK INKVVNDNEA IPVTRSGSER SREDFQSSID
AFINEAERFV ELVKNQDFTK PSSVSFETCS TCGFKHICRT AYSVK
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